Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.237-201ENST00000364439 102 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 RNU6-338P-201ENST00000383888 105 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.555-201ENST00000384673 110 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 MIR215-201ENST00000384858 110 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.581-201ENST00000391017 97 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 RPL26P27-201ENST00000414397 437 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AL591043.1-201ENST00000432461 424 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.1□□□□□ -1.91
SALL3Q9BXA9 RNU7-87P-201ENST00000459343 62 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 RNU4-71P-201ENST00000516258 113 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.1□□□□□ -1.91
SALL3Q9BXA9 CR383656.8-201ENST00000549046 145 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 RRN3P3-201ENST00000549207 578 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AC136932.1-201ENST00000574771 208 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 MIR5092-201ENST00000583139 88 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AC010928.2-201ENST00000588017 287 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 RPL23AP88-201ENST00000605759 454 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AC004832.5-201ENST00000608677 401 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 MIR376A1-201ENST00000616574 68 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 IGHVIII-44-202ENST00000636235 289 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SALL3Q9BXA9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
SALL3Q9BXA9 AC009541.1-201ENST00000438279 2662 ntBASIC3.1□□□□□ -1.91
SALL3Q9BXA9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 RNU6-527P-201ENST00000363425 104 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 RNA5SP456-201ENST00000364002 114 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 RNU6-1286P-201ENST00000383871 107 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 SNORD78.2-201ENST00000391076 69 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 RNU2-14P-201ENST00000411053 191 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 RPL39P40-201ENST00000445481 146 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 AC016700.2-201ENST00000446011 156 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 AC096725.1-201ENST00000514266 313 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 AL137100.2-201ENST00000555786 315 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 AC073410.2-201ENST00000603240 332 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 MIR6134-201ENST00000617606 109 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.09□□□□□ -1.91
SALL3Q9BXA9 AC241585.2-209ENST00000638217 143 ntBASIC3.09□□□□□ -1.91
SALL3Q9BXA9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.09□□□□□ -1.92
SALL3Q9BXA9 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.92
SALL3Q9BXA9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
SALL3Q9BXA9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SALL3Q9BXA9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SALL3Q9BXA9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SALL3Q9BXA9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
SALL3Q9BXA9 RNU6-1301P-201ENST00000362724 104 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 RNU6-137P-201ENST00000363680 108 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 RNA5SP139-201ENST00000364340 117 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 RNU1-73P-201ENST00000383971 164 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 MIR888-201ENST00000401186 77 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 AL512844.2-201ENST00000433990 593 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.08□□□□□ -1.92
SALL3Q9BXA9 AC243964.1-201ENST00000441814 261 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 AC009296.1-201ENST00000443146 155 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 RPS26P21-201ENST00000475397 348 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 RNU6-1338P-201ENST00000516328 91 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 SNORA81.3-201ENST00000517283 198 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.08□□□□□ -1.92
SALL3Q9BXA9 AC016717.2-201ENST00000609089 5141 ntBASIC3.08□□□□□ -1.92
SALL3Q9BXA9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AL136360.1-201ENST00000503377 1900 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.29-201ENST00000362570 113 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.143-201ENST00000363520 106 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 SNORD27-201ENST00000363981 72 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RNU6-968P-201ENST00000384076 107 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 Y_RNA.462-201ENST00000384268 102 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 MIR27B-201ENST00000385129 97 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RNA5SP213-201ENST00000391031 106 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RNU1-139P-201ENST00000391307 165 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AL603910.2-201ENST00000407268 136 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RNA5SP184-201ENST00000411071 108 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RNU6-1245P-201ENST00000411130 106 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AC009963.1-201ENST00000417265 157 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RPL23AP95-201ENST00000426806 265 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.07□□□□□ -1.92
SALL3Q9BXA9 Z82188.1-201ENST00000436709 154 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AL031659.1-201ENST00000447075 539 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 U8.22-201ENST00000459141 133 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 snoU13.28-201ENST00000459235 104 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RPL23AP49-201ENST00000492925 468 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.07□□□□□ -1.92
SALL3Q9BXA9 RN7SKP282-201ENST00000516824 299 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 DEFB108E-201ENST00000524692 240 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 MRPS36P4-201ENST00000534436 298 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 MIR4659A-201ENST00000580269 81 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 AC024581.2-201ENST00000619986 252 ntBASIC3.07□□□□□ -1.92
SALL3Q9BXA9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms