Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SNORA25-201ENST00000384384 134 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 RNU6-456P-201ENST00000384493 107 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 MIR515-2-201ENST00000384883 83 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 MIR515-1-201ENST00000384884 83 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
UPK3BQ9BT76 AL031577.2-201ENST00000404133 280 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 AC114982.1-201ENST00000469402 321 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 HMGN1P12-201ENST00000499125 195 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 RNU6-1146P-201ENST00000516282 102 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 CYCSP23-201ENST00000519781 313 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 CENPUP1-201ENST00000526649 1202 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 BX284668.6-201ENST00000606899 438 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 AC004492.1-201ENST00000607036 742 ntBASIC0.72□□□□□ -2.29
UPK3BQ9BT76 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 MIR1287-201ENST00000408492 90 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 RNU2-29P-201ENST00000410423 189 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 MTCO2P3-201ENST00000442543 421 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 SNRPFP3-201ENST00000457792 225 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 MIR5006-201ENST00000583027 110 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AC136443.5-201ENST00000603741 370 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AL391646.1-201ENST00000603860 190 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AC064872.1-201ENST00000604823 1072 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 AC104458.1-201ENST00000608243 463 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.71□□□□□ -2.3
UPK3BQ9BT76 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
UPK3BQ9BT76 RNU6-1123P-201ENST00000362347 106 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 snoU2-30.2-201ENST00000362805 70 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 Y_RNA.191-201ENST00000363972 113 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 RNU6-1235P-201ENST00000384559 107 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 RNU6-950P-201ENST00000384651 107 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 RNU6-606P-201ENST00000384721 111 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 BX295541.1-201ENST00000417774 250 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC010099.3-201ENST00000423896 409 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC004386.2-201ENST00000441858 148 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC016717.1-201ENST00000448918 286 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK3BQ9BT76 SNRPGP9-201ENST00000456025 225 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 RNU7-167P-201ENST00000459160 62 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 RNU6-498P-201ENST00000459468 107 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 RNU6-1129P-201ENST00000515964 104 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 SNORD116-28-201ENST00000516123 91 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 SNORA18.6-201ENST00000516792 115 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC016256.1-201ENST00000547971 354 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC008015.1-201ENST00000555505 465 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 U2.17-201ENST00000611454 95 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 MIR6857-201ENST00000613267 93 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC122133.1-201ENST00000613964 233 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 TCL6_2.1-201ENST00000615162 119 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC005562.2-201ENST00000618264 111 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC012676.2-201ENST00000619258 186 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC009161.2-201ENST00000624626 138 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 AC068647.2-201ENST00000637380 353 ntBASIC0.7□□□□□ -2.3
UPK3BQ9BT76 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU4-38P-201ENST00000364472 129 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU6-534P-201ENST00000364877 106 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU6-975P-201ENST00000384296 105 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 MIR1253-201ENST00000408273 105 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AC074290.1-201ENST00000448883 135 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU7-125P-201ENST00000458760 62 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 snoU13.6-201ENST00000458785 104 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RPL39P28-201ENST00000465655 155 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RPS23P4-201ENST00000487908 423 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.69□□□□□ -2.3
UPK3BQ9BT76 UBL5P1-201ENST00000507979 193 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AC105417.1-201ENST00000514691 285 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU6-113P-201ENST00000516653 101 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 RNU6-232P-201ENST00000517144 64 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 SUMO2P16-201ENST00000519475 264 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 DEFB131C-201ENST00000528817 165 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AP002963.1-201ENST00000530590 184 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AL137161.1-201ENST00000532231 390 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AC026470.2-201ENST00000561492 181 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AC234772.3-201ENST00000602277 528 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AL022345.2-201ENST00000606307 135 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 SNORD114-21-201ENST00000606412 72 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AF246928.1-201ENST00000623768 87 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AC079248.2-201ENST00000623779 326 ntBASIC0.69□□□□□ -2.3
UPK3BQ9BT76 AC027335.2-201ENST00000624030 375 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms