Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 CEP170P1-201ENST00000502249 4587 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 SNORD115-30-201ENST00000364117 82 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 SNORA14A-201ENST00000364773 135 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-283P-201ENST00000364788 107 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 SNORA8.3-201ENST00000384679 139 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-1168P-201ENST00000390831 104 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 RN7SL323P-201ENST00000494712 295 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-426P-201ENST00000516464 97 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 MIR4431-201ENST00000579990 94 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 MIR4744-201ENST00000581563 82 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 AL606490.9-201ENST00000603331 271 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 MIR6075-201ENST00000620782 95 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 AC039056.2-201ENST00000622261 511 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 CR392039.5-201ENST00000623201 510 ntBASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM56Q9BRZ2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-801P-201ENST00000364087 105 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-376P-201ENST00000384731 106 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 PTMAP2-201ENST00000397627 327 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-735P-201ENST00000410612 107 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AL139247.1-201ENST00000422768 325 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 Z75741.1-201ENST00000446793 314 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AL133547.1-201ENST00000448546 220 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AC112771.1-201ENST00000463581 102 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AC145146.1-201ENST00000496370 254 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AC107027.2-201ENST00000512197 115 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AC244505.7-201ENST00000599675 272 ntBASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM56Q9BRZ2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 SNORD87-201ENST00000364849 89 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 U8.12-201ENST00000384701 133 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 MIR569-201ENST00000385228 96 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-578P-201ENST00000390980 103 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 RNA5SP354-201ENST00000391247 136 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 AC010409.1-201ENST00000487382 476 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 RN7SKP209-201ENST00000516888 304 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 RNU1-117P-201ENST00000517041 158 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 AC021269.2-201ENST00000532318 330 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 AC087499.8-201ENST00000578406 226 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 MIR5685-201ENST00000579080 79 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 MIR548X2-201ENST00000579776 100 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 AC069294.1-201ENST00000608397 350 ntBASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRIM56Q9BRZ2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 RNU1-75P-201ENST00000347264 129 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 MIR208A-201ENST00000362287 71 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 SNORA71.3-201ENST00000362582 128 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 Y_RNA.81-201ENST00000362997 102 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-899P-201ENST00000363947 107 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 RNA5SP387-201ENST00000364226 106 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 Y_RNA.243-201ENST00000364481 109 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 Y_RNA.293-201ENST00000364908 93 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 SNORA18.2-201ENST00000383865 132 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 SNORA72.4-201ENST00000384174 132 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 SNORA22C-201ENST00000384614 134 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 MIR30B-201ENST00000384850 88 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 SNORA26.5-201ENST00000391215 123 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 AL355497.1-201ENST00000406262 551 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 AC004866.1-201ENST00000411748 78 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 AC008267.6-201ENST00000441664 139 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 RNU7-121P-201ENST00000516604 62 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 SNORD59.2-201ENST00000516873 68 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-711P-201ENST00000517255 106 ntBASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM56Q9BRZ2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms