Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 U8.13-201ENST00000390842 128 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 SNORA12.2-201ENST00000391040 156 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SDF4Q9BRK5 RNA5SP489-201ENST00000410986 109 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC244636.1-201ENST00000421152 228 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AL445685.2-201ENST00000422551 342 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 MTND1P4-201ENST00000435196 415 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 SNRPEP8-201ENST00000442866 260 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 RPL23AP75-201ENST00000491601 451 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.19□□□□□ -2.06
SDF4Q9BRK5 MIR4299-201ENST00000577899 72 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 POLR3GP2-201ENST00000588366 668 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AP003465.2-201ENST00000602571 373 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AL096840.1-201ENST00000603287 93 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC016727.2-201ENST00000603988 621 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC124303.1-201ENST00000605703 360 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC007014.2-201ENST00000615581 479 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AL590240.4-201ENST00000616908 390 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AC005562.2-201ENST00000618264 111 ntBASIC2.19□□□□□ -2.06
SDF4Q9BRK5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.19□□□□□ -2.06
SDF4Q9BRK5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.19□□□□□ -2.06
SDF4Q9BRK5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 RNA5SP501-201ENST00000410990 112 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AL591806.2-201ENST00000433122 173 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC007395.1-201ENST00000451333 677 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC087477.1-201ENST00000465747 340 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 RNA5SP182-201ENST00000516064 82 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 RNU2-44P-201ENST00000516795 194 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 RNU6-295P-201ENST00000516901 104 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 DEFB131C-201ENST00000528817 165 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 ANP32BP3-201ENST00000559213 706 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 DEFB122-202ENST00000569013 197 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AP000907.4-201ENST00000604143 237 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC019193.3-201ENST00000609144 554 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 TCL6_2.1-201ENST00000615162 119 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 AC098679.4-201ENST00000624241 654 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 SCARNA4-201ENST00000629045 128 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.18□□□□□ -2.06
SDF4Q9BRK5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.17□□□□□ -2.06
SDF4Q9BRK5 CBX3P1-201ENST00000325243 554 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 RNU6-1026P-201ENST00000384465 108 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 SNORA48.1-201ENST00000390879 135 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 MIR300-201ENST00000401138 83 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 RNU2-20P-201ENST00000410425 191 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.17□□□□□ -2.06
SDF4Q9BRK5 MTND4LP16-201ENST00000440828 295 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.17□□□□□ -2.06
SDF4Q9BRK5 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 snoU13.23-201ENST00000458863 104 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 ACA59.1-201ENST00000515966 143 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 MIR514B-201ENST00000516774 80 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AC110588.1-201ENST00000559699 137 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AC005786.1-201ENST00000588553 154 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AC008749.1-201ENST00000597650 306 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AC098657.3-201ENST00000620434 263 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AL359697.1-201ENST00000624879 587 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.17□□□□□ -2.06
SDF4Q9BRK5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AC027514.1-201ENST00000588561 1603 ntBASIC2.17□□□□□ -2.06
SDF4Q9BRK5 AL358453.1-201ENST00000422522 250 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 AC139712.2-201ENST00000424302 339 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 MTCO1P44-201ENST00000441935 243 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 RNU6-1088P-201ENST00000516850 104 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.16□□□□□ -2.06
SDF4Q9BRK5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.16□□□□□ -2.06
SDF4Q9BRK5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.16□□□□□ -2.06
SDF4Q9BRK5 MIR4524B-201ENST00000581569 115 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 AC018638.8-201ENST00000588755 281 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.16□□□□□ -2.06
SDF4Q9BRK5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.16□□□□□ -2.06
SDF4Q9BRK5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.16□□□□□ -2.06
SDF4Q9BRK5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SDF4Q9BRK5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SDF4Q9BRK5 Y_RNA.301-201ENST00000364990 103 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 RNU6-596P-201ENST00000365395 98 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 U8.10-201ENST00000384260 133 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 SNORA40.18-201ENST00000391200 128 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 HMGN2P19-201ENST00000425149 265 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.15□□□□□ -2.07
SDF4Q9BRK5 MTND1P17-201ENST00000448961 204 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 FGF7P6-202ENST00000451282 293 ntBASIC2.15□□□□□ -2.07
SDF4Q9BRK5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms