Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 CYCTP-201ENST00000504253 315 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 MTCO3P27-201ENST00000514397 196 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RNU2-34P-201ENST00000516534 121 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 LRRC6P1-201ENST00000532188 885 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 BNIP3P26-201ENST00000600827 554 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 AL162730.1-201ENST00000605734 292 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 uc_338.34-201ENST00000617467 174 ntBASIC-0.12□□□□□ -2.43
VPS25Q9BRG1 SNORA2.2-201ENST00000365473 135 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 RNU6-975P-201ENST00000384296 105 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 MIR520F-201ENST00000384824 87 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 MIR936-201ENST00000401264 98 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 RNU6-57P-201ENST00000411348 103 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AL663109.1-201ENST00000411498 844 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AL356583.2-201ENST00000426536 280 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AC073261.1-201ENST00000429409 121 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 MTCO1P19-201ENST00000443487 500 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 LINC01399-202ENST00000458450 244 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 RNU6-377P-201ENST00000515965 102 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 RNU6-948P-201ENST00000516374 107 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 RNU2-10P-201ENST00000516375 211 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 RNU1-142P-201ENST00000516682 145 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 EIF1P4-201ENST00000572664 335 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 AC007014.2-201ENST00000615581 479 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 SEPT14P17-201ENST00000617978 177 ntBASIC-0.13□□□□□ -2.43
VPS25Q9BRG1 MIR337-201ENST00000362281 93 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 U3.4-201ENST00000363352 213 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 SNORD114-9-201ENST00000364370 72 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 U8.16-201ENST00000391279 133 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 MIR300-201ENST00000401138 83 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 MIR1185-1-201ENST00000408598 86 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 RNU6-994P-201ENST00000410507 111 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AC090960.1-201ENST00000421072 306 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AC078809.1-201ENST00000427601 140 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 RPL17P35-201ENST00000432217 549 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 RNU7-128P-201ENST00000517247 62 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AC022784.5-201ENST00000522241 437 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AC022523.2-201ENST00000561045 150 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 SNORA4-201ENST00000584302 138 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 MIR4768-201ENST00000585270 74 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 AP002360.4-201ENST00000606980 481 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.14□□□□□ -2.43
VPS25Q9BRG1 RNU6-433P-201ENST00000363216 104 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 RNA5SP214-201ENST00000363378 118 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AC067940.1-201ENST00000458411 300 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 snoU13.6-201ENST00000458785 104 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AC079395.1-201ENST00000510981 262 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AP003327.1-201ENST00000529684 127 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AC016256.1-201ENST00000547971 354 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 RPL23AP91-201ENST00000569211 455 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AC004223.2-201ENST00000590309 544 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AC072039.2-201ENST00000608883 439 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 AC092634.7-201ENST00000621022 103 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 SNORA43.4-201ENST00000629559 138 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 OR5AK4P-201ENST00000635912 903 ntBASIC-0.15□□□□□ -2.43
VPS25Q9BRG1 RNU6-562P-201ENST00000362731 107 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 RNU4-67P-201ENST00000364569 141 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 SNORA24.1-201ENST00000384401 135 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 SNORD83.1-201ENST00000411362 77 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AC004866.1-201ENST00000411748 78 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AL354692.1-201ENST00000423044 315 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AL133396.1-201ENST00000432048 687 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 MTND1P32-201ENST00000433043 938 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AC010486.2-201ENST00000505572 483 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 RNU6-863P-201ENST00000515989 104 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 RNU6-405P-201ENST00000516637 110 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 RNU6-467P-201ENST00000517027 110 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AC069113.3-201ENST00000521019 150 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AF235103.2-201ENST00000525753 346 ntBASIC-0.16□□□□□ -2.44
VPS25Q9BRG1 AC036111.3-201ENST00000526389 112 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms