Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MIR449C-201ENST00000516047 92 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 RNU6-58P-201ENST00000517143 103 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 AC027288.2-201ENST00000553028 243 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 AL442663.2-201ENST00000554385 511 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 AC020661.2-201ENST00000560114 134 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP88Q99567 AC006600.1-201ENST00000572529 153 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 AC090617.3-201ENST00000573670 475 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 SNRPGP17-201ENST00000603780 214 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 SNRPGP20-201ENST00000604477 205 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 AL132822.1-201ENST00000617063 513 ntBASIC2.98□□□□□ -1.93
NUP88Q99567 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP88Q99567 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP88Q99567 Y_RNA.28-201ENST00000362554 111 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 RNU6-879P-201ENST00000364328 108 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 SNORA18.2-201ENST00000383865 132 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 RNY1P14-201ENST00000384426 108 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 RNA5SP210-201ENST00000391034 120 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 SNORA26.7-201ENST00000391288 122 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 RNU2-25P-201ENST00000411041 191 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 RNU2-32P-201ENST00000411193 191 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 MCFD2P1-201ENST00000417812 300 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 AC018865.2-201ENST00000423631 129 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 RNU7-26P-201ENST00000458980 63 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 AL163540.1-201ENST00000485382 386 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.97□□□□□ -1.93
NUP88Q99567 RNU6-1114P-201ENST00000516022 107 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 AP003072.1-201ENST00000531740 145 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 CBX3P7-201ENST00000532876 502 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 AC016925.2-201ENST00000605108 242 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP88Q99567 AC005296.1-201ENST00000616145 209 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
NUP88Q99567 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NUP88Q99567 ZNF72P-201ENST00000425869 1908 ntBASIC2.97□□□□□ -1.93
NUP88Q99567 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NUP88Q99567 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
NUP88Q99567 SNORD114-30-201ENST00000364448 72 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 RNU1-115P-201ENST00000365329 160 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 RNU6-546P-201ENST00000383991 107 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 Y_RNA.557-201ENST00000384680 107 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 RPL21P75-201ENST00000396599 483 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 RPL21P28-201ENST00000401418 483 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 Y_RNA.592-201ENST00000410274 109 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 PMCHL1-202ENST00000423102 261 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 OOSP1P1-201ENST00000423265 274 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 CBX3P6-201ENST00000430257 527 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AL160004.2-201ENST00000432935 350 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP88Q99567 RPL21P39-201ENST00000463605 483 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AC087190.1-201ENST00000484462 480 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AC093591.1-201ENST00000491435 481 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 RPL21P16-201ENST00000495531 483 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.96□□□□□ -1.94
NUP88Q99567 SNORA25.10-201ENST00000515926 124 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 SNORA25.14-201ENST00000516481 132 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 RNU5F-4P-201ENST00000516581 114 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 RNU6-826P-201ENST00000516827 104 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 Y_RNA.711-201ENST00000516993 102 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.96□□□□□ -1.94
NUP88Q99567 AC026470.2-201ENST00000561492 181 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AC023824.2-201ENST00000566185 400 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 MIR3945-201ENST00000581853 98 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP88Q99567 AC087588.2-201ENST00000617667 426 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AC005562.2-201ENST00000618264 111 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 AL138825.1-201ENST00000618587 192 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 U2.1-201ENST00000618978 145 ntBASIC2.96□□□□□ -1.94
NUP88Q99567 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
NUP88Q99567 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NUP88Q99567 RNU5F-3P-201ENST00000363767 117 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 SNORA38-201ENST00000363946 132 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 RNU6-280P-201ENST00000364145 104 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 RNU6-743P-201ENST00000364151 106 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 SNORA22B-201ENST00000383876 138 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 MIR27B-201ENST00000385129 97 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NUP88Q99567 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
NUP88Q99567 AC003685.2-201ENST00000422795 395 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP88Q99567 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.95□□□□□ -1.94
NUP88Q99567 MTND4P19-201ENST00000446659 478 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 SNORA48.11-201ENST00000517015 89 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP88Q99567 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP88Q99567 MIR5006-201ENST00000583027 110 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 AC040896.1-201ENST00000613819 479 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 AL606534.2-204ENST00000635008 178 ntBASIC2.95□□□□□ -1.94
NUP88Q99567 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP88Q99567 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NUP88Q99567 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NUP88Q99567 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUP88Q99567 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUP88Q99567 RNU1-23P-201ENST00000363361 144 ntBASIC2.94□□□□□ -1.94
NUP88Q99567 RNU6-873P-201ENST00000363833 107 ntBASIC2.94□□□□□ -1.94
NUP88Q99567 SNORD115-8-201ENST00000363856 82 ntBASIC2.94□□□□□ -1.94
NUP88Q99567 SNORD32B-201ENST00000364460 84 ntBASIC2.94□□□□□ -1.94
NUP88Q99567 SNORD115-38-201ENST00000365037 82 ntBASIC2.94□□□□□ -1.94
NUP88Q99567 RNU6-26P-201ENST00000383985 107 ntBASIC2.94□□□□□ -1.94
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