Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 MAPK10-322ENST00000641485 4530 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR422A-201ENST00000362286 90 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 Y_RNA.101-201ENST00000363154 102 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-151P-201ENST00000364158 107 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-173P-201ENST00000364215 104 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-215P-201ENST00000365169 102 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-449P-201ENST00000383914 107 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-1145P-201ENST00000384246 107 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR569-201ENST00000385228 96 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR325-201ENST00000385260 98 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU2-68P-201ENST00000410878 191 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 AC091179.1-201ENST00000461606 579 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 SUMO2P18-201ENST00000518873 252 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 DEFB131C-201ENST00000528817 165 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR3200-201ENST00000580767 85 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 AC005176.2-201ENST00000596933 147 ntBASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDK5RAP1Q96SZ6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 DEFB108F-201ENST00000344638 222 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-942P-201ENST00000363002 107 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU5B-2P-201ENST00000363036 113 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 Y_RNA.218-201ENST00000364218 104 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORD32A-201ENST00000364805 84 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORA46.1-201ENST00000391069 153 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 BTF3P11-201ENST00000426582 477 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-191P-201ENST00000516295 94 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-971P-201ENST00000516920 106 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 MTND1P7-201ENST00000632801 297 ntBASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDK5RAP1Q96SZ6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 AL353743.1-202ENST00000431724 1695 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-159P-201ENST00000391080 106 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 Y_RNA.629-201ENST00000411368 105 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 AP000705.1-201ENST00000454567 350 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 RPS29P2-201ENST00000479278 136 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 RNA5SP217-201ENST00000515959 91 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-1234P-201ENST00000516877 103 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-58P-201ENST00000517143 103 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 UBL5P2-201ENST00000583788 219 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 AC136601.2-201ENST00000604356 474 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 AL162274.2-201ENST00000614406 332 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 AC068700.1-201ENST00000565862 3754 ntBASIC3.25□□□□□ -1.89
CDK5RAP1Q96SZ6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORD56.1-201ENST00000362913 68 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 RNA5SP383-201ENST00000362934 120 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 Y_RNA.182-201ENST00000363880 111 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 Y_RNA.238-201ENST00000364441 102 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORA14A-201ENST00000364773 135 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 Y_RNA.353-201ENST00000365440 108 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 MIR518D-201ENST00000385014 87 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 SNORA48.5-201ENST00000391143 135 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC245291.1-201ENST00000419501 328 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AL035461.1-201ENST00000421490 332 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC090616.3-201ENST00000582184 217 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 DEFB117-201ENST00000602356 141 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC005000.2-201ENST00000605468 310 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 CUL1P1-201ENST00000509510 2425 ntBASIC3.24□□□□□ -1.89
CDK5RAP1Q96SZ6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms