Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL513423.1-201ENST00000621695 132 ntBASIC-0.18□□□□□ -2.44
IFT140Q96RY7 BX322639.1-202ENST00000423987 2213 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 U8.7-201ENST00000364940 136 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 SMIM11P1-201ENST00000369586 178 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 RNU6-43P-201ENST00000384302 107 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 RPS20P2-201ENST00000402520 389 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 RNU4-22P-201ENST00000411058 166 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
IFT140Q96RY7 OR9P1P-201ENST00000496431 281 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 AC093534.1-201ENST00000504977 132 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 MTCO3P9-201ENST00000506989 781 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 AC113347.3-201ENST00000509113 148 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.19□□□□□ -2.44
IFT140Q96RY7 AC022523.2-201ENST00000561045 150 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.19□□□□□ -2.44
IFT140Q96RY7 MIR5708-201ENST00000579723 85 ntBASIC-0.19□□□□□ -2.44
IFT140Q96RY7 RNU6-199P-201ENST00000362954 107 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 RNU6-527P-201ENST00000363425 104 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 RNU6-39P-201ENST00000384344 107 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 RNA5SP323-201ENST00000391094 133 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AL356583.2-201ENST00000426536 280 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC109445.1-201ENST00000512356 383 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.2□□□□□ -2.44
IFT140Q96RY7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.2□□□□□ -2.44
IFT140Q96RY7 RNY4P37-201ENST00000516225 96 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC087883.1-201ENST00000551882 391 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC104072.1-201ENST00000568817 668 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC174048.1-201ENST00000603389 144 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC131159.1-201ENST00000621854 213 ntBASIC-0.2□□□□□ -2.44
IFT140Q96RY7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.2□□□□□ -2.44
IFT140Q96RY7 RNU4-56P-201ENST00000364700 142 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 RNU6V-201ENST00000384105 107 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 MTCO1P17-201ENST00000411522 491 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 MTND1P20-201ENST00000430341 950 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 AL606517.2-201ENST00000442855 241 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 RPS23P5-201ENST00000495419 428 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 AC024995.1-201ENST00000523014 93 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 MTCO3P15-201ENST00000526563 574 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 MIR4778-201ENST00000577635 80 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.21□□□□□ -2.44
IFT140Q96RY7 AL390123.1-201ENST00000603216 237 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 RMST_7.1-201ENST00000621935 268 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.21□□□□□ -2.44
IFT140Q96RY7 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 MIR660-201ENST00000385235 97 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 SNORD105-201ENST00000386910 85 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 TIMM9P2-201ENST00000419324 266 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.22□□□□□ -2.44
IFT140Q96RY7 MTCYBP10-201ENST00000424905 650 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AC073261.1-201ENST00000429409 121 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AP000542.1-201ENST00000448473 371 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AC069113.3-201ENST00000521019 150 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 MTND1P15-201ENST00000579262 949 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AC026585.1-201ENST00000619582 524 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AL078595.3-201ENST00000623815 1166 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 AC092104.1-201ENST00000497346 1441 ntBASIC-0.22□□□□□ -2.44
IFT140Q96RY7 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 RNU6-190P-201ENST00000384154 102 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 TIMM9P3-201ENST00000428659 274 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 MTCO1P19-201ENST00000443487 500 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 LINC01399-202ENST00000458450 244 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 SNRPGP7-201ENST00000469016 106 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 AC025465.4-201ENST00000513422 638 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 RNU6-551P-201ENST00000516661 103 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.22□□□□□ -2.45
IFT140Q96RY7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
IFT140Q96RY7 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-0.22□□□□□ -2.45
IFT140Q96RY7 MIR3923-201ENST00000579521 83 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 AC234772.3-201ENST00000602277 528 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.22□□□□□ -2.45
IFT140Q96RY7 MIR8054-201ENST00000620877 86 ntBASIC-0.22□□□□□ -2.45
IFT140Q96RY7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.23□□□□□ -2.45
IFT140Q96RY7 MIR103A2-201ENST00000362154 78 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 RNU6-815P-201ENST00000384080 113 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 RNU6-514P-201ENST00000384208 107 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 RNU6-30P-201ENST00000384561 107 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 RNU6-417P-201ENST00000384712 107 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AL590135.1-201ENST00000422215 156 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AC019205.3-201ENST00000424573 156 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AC016700.2-201ENST00000446011 156 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AC015911.1-201ENST00000495111 156 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 MTND4LP26-201ENST00000518144 282 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AL512347.1-201ENST00000566420 503 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AC069545.1-201ENST00000605671 358 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AL391903.3-201ENST00000612158 163 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 AC092634.7-201ENST00000621022 103 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 FRG1KP-201ENST00000623592 341 ntBASIC-0.23□□□□□ -2.45
IFT140Q96RY7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms