Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SNORA29-201ENST00000384183 140 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NEK1Q96PY6 SNORA40.19-201ENST00000390846 128 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 SNORA26.3-201ENST00000391119 136 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 AC019129.1-201ENST00000403786 261 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 AC138393.2-201ENST00000414742 246 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 AC012306.1-201ENST00000423267 114 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.25□□□□□ -2.05
NEK1Q96PY6 snoU13.6-201ENST00000458785 104 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.25□□□□□ -2.05
NEK1Q96PY6 SNORA4.4-201ENST00000515921 135 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 ACA59.1-201ENST00000515966 143 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 RNU6-567P-201ENST00000516746 107 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.25□□□□□ -2.05
NEK1Q96PY6 AC109446.1-201ENST00000566172 220 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 AC026271.5-201ENST00000577873 130 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 MIR4801-201ENST00000582704 82 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 MIR6845-201ENST00000613182 61 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 AC091932.3-201ENST00000624223 323 ntBASIC2.25□□□□□ -2.05
NEK1Q96PY6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.24□□□□□ -2.05
NEK1Q96PY6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NEK1Q96PY6 RNU6-743P-201ENST00000364151 106 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 MIR208B-201ENST00000401172 77 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 MIR548F5-201ENST00000408421 86 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 DAP3P1-201ENST00000441522 278 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 MTND1P17-201ENST00000448961 204 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 AC018868.1-201ENST00000491307 315 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 AC116353.2-201ENST00000505332 712 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.24□□□□□ -2.05
NEK1Q96PY6 AC034114.1-201ENST00000520293 285 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 CYP4A27P-201ENST00000567218 190 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 FGF7P1-201ENST00000582820 288 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 AL096840.1-201ENST00000603287 93 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 AL627230.6-201ENST00000611129 280 ntBASIC2.24□□□□□ -2.05
NEK1Q96PY6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 MIR337-201ENST00000362281 93 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 RNU6-378P-201ENST00000384324 107 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 MIR676-201ENST00000390702 67 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 RNA5SP213-201ENST00000391031 106 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 SUMO2P12-201ENST00000405924 140 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 RNA5SP494-201ENST00000410653 129 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 AC074085.1-201ENST00000413598 418 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 MTND5P5-201ENST00000503764 376 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 AL117351.2-201ENST00000513571 157 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 MIR449C-201ENST00000516047 92 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 RNU6-667P-201ENST00000517186 102 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 MIR4529-201ENST00000578110 78 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.23□□□□□ -2.05
NEK1Q96PY6 AC233981.2-201ENST00000611524 1614 ntBASIC2.23□□□□□ -2.05
NEK1Q96PY6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.22□□□□□ -2.05
NEK1Q96PY6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
NEK1Q96PY6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.22□□□□□ -2.05
NEK1Q96PY6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 RNU6-784P-201ENST00000384330 106 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 MTCYBP2-201ENST00000407745 171 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 MIR1294-201ENST00000408503 142 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 RPS3AP52-201ENST00000435639 297 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 AC098614.3-201ENST00000438957 440 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 AC107399.1-201ENST00000451226 265 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.22□□□□□ -2.05
NEK1Q96PY6 FO393415.2-201ENST00000480085 343 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 AC103851.1-201ENST00000506833 274 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 SNORA20.3-201ENST00000516880 132 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 AC022616.8-201ENST00000533569 253 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 MIR4273-201ENST00000582824 84 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 SNRPGP17-201ENST00000603780 214 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.22□□□□□ -2.05
NEK1Q96PY6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
NEK1Q96PY6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
NEK1Q96PY6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NEK1Q96PY6 SNORD50.1-201ENST00000362987 71 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 RNU6-1059P-201ENST00000363752 98 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 U3.9-201ENST00000363823 204 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 Y_RNA.184-201ENST00000363884 108 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 MIR548K-201ENST00000408406 116 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 RNA5SP201-201ENST00000410316 124 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 RNA5SP489-201ENST00000410986 109 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 CYCSP49-201ENST00000420810 319 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 CBX3P6-201ENST00000430257 527 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 USP9YP30-201ENST00000430729 455 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.21□□□□□ -2.06
NEK1Q96PY6 MTND3P10-201ENST00000450967 341 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.21□□□□□ -2.06
NEK1Q96PY6 AC018630.3-201ENST00000542637 96 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 AC016256.1-201ENST00000547971 354 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms