Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.31□□□□□ -2.2
LINC00477Q96M19 MTATP6P13-201ENST00000438531 667 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC00477Q96M19 MTCO1P29-201ENST00000496868 288 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 RPL23AP63-201ENST00000498752 471 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 RNU6-1098P-201ENST00000516772 96 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 RN7SKP256-201ENST00000517201 314 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC022616.8-201ENST00000533569 253 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC018630.3-201ENST00000542637 96 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC021231.3-201ENST00000558497 370 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 BNIP3P10-201ENST00000605360 577 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC009994.1-201ENST00000606889 253 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC122108.2-201ENST00000611946 526 ntBASIC1.31□□□□□ -2.2
LINC00477Q96M19 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.31□□□□□ -2.2
LINC00477Q96M19 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.31□□□□□ -2.2
LINC00477Q96M19 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 RNU6-1286P-201ENST00000383871 107 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 Y_RNA.404-201ENST00000383978 102 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 RNU6-142P-201ENST00000384019 107 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 U8.10-201ENST00000384260 133 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 SNORA40.18-201ENST00000391200 128 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 MIR1294-201ENST00000408503 142 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 RNU6-373P-201ENST00000411247 98 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AL358453.1-201ENST00000422522 250 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 MTCO3P46-201ENST00000425787 232 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC078809.1-201ENST00000427601 140 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 MTCO3P29-201ENST00000432119 779 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 RPS3AP52-201ENST00000435639 297 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC112492.4-201ENST00000456549 352 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 PPP1R2P5-201ENST00000457256 603 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 TOMM22P6-201ENST00000465035 409 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 RPL30P10-201ENST00000488148 337 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 RPL23AP75-201ENST00000491601 451 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC104564.1-201ENST00000493028 407 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 RPS29P11-201ENST00000496507 171 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC016632.1-201ENST00000503994 196 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC103851.1-201ENST00000506833 274 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC093259.1-201ENST00000509755 300 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 RNU6-970P-201ENST00000516312 107 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 RNU7-30P-201ENST00000516835 62 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC110588.1-201ENST00000559699 137 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 AL670379.2-201ENST00000604983 252 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AC009318.2-201ENST00000610917 651 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 MIR8076-201ENST00000611401 83 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 MIR8081-201ENST00000611533 95 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 MIR6128-201ENST00000615528 109 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AL359314.1-201ENST00000616913 261 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 U1.36-201ENST00000620684 176 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AL359757.2-201ENST00000624309 274 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC00477Q96M19 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 AP000560.1-201ENST00000624150 1937 ntBASIC1.3□□□□□ -2.2
LINC00477Q96M19 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LINC00477Q96M19 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.29□□□□□ -2.2
LINC00477Q96M19 RNU6-874P-201ENST00000362390 105 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 SNORD48-201ENST00000364953 64 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 RNA5SP363-201ENST00000365072 115 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 SNORD81.2-201ENST00000365153 76 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 SNORA18.2-201ENST00000383865 132 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 RNU6-128P-201ENST00000383976 107 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 RNU6-784P-201ENST00000384330 106 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 Y_RNA.573-201ENST00000384763 105 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 RNU6-876P-201ENST00000391295 104 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 BTF3L4P2-201ENST00000392798 346 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 MIR208B-201ENST00000401172 77 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 MIR548K-201ENST00000408406 116 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC009310.1-201ENST00000414414 451 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC012306.1-201ENST00000423267 114 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AL645568.3-201ENST00000433683 316 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 HMGN2P18-201ENST00000450680 270 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC00477Q96M19 SNORA59A-201ENST00000459326 152 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC00477Q96M19 RPS29P21-201ENST00000496272 170 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 HMGN1P12-201ENST00000499125 195 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC026782.1-201ENST00000512952 449 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC00477Q96M19 Y_RNA.670-201ENST00000516255 105 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 RNA5SP384-201ENST00000516615 116 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 CBX3P8-201ENST00000532412 525 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 AC104581.2-201ENST00000572227 430 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 MIR4790-201ENST00000577799 79 ntBASIC1.29□□□□□ -2.2
LINC00477Q96M19 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms