Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC092809.3-201ENST00000415453 231 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.46□□□□□ -2.48
SPG11Q96JI7 PPP1R11P2-201ENST00000423543 382 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.46□□□□□ -2.48
SPG11Q96JI7 SKA2P1-201ENST00000425592 390 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 MTND4P32-201ENST00000437189 1237 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.46□□□□□ -2.48
SPG11Q96JI7 MTND5P13-201ENST00000513046 1079 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.46□□□□□ -2.48
SPG11Q96JI7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.46□□□□□ -2.48
SPG11Q96JI7 MIR4782-201ENST00000577987 79 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 MIR4804-201ENST00000581683 73 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 MIR196A1-201ENST00000388006 70 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AL451046.2-201ENST00000403074 277 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 RNU6-57P-201ENST00000411348 103 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AC087499.4-201ENST00000448505 178 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 MTND2P24-201ENST00000453434 806 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AC023050.3-201ENST00000541142 333 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 AL359697.1-201ENST00000624879 587 ntBASIC-0.46□□□□□ -2.48
SPG11Q96JI7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 AC083799.1-201ENST00000366451 910 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 RNU6-127P-201ENST00000390897 107 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 RNU2-59P-201ENST00000410482 191 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 AC093850.1-201ENST00000454121 251 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 AC107401.1-201ENST00000503426 685 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 RN7SKP19-201ENST00000516016 252 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.47□□□□□ -2.48
SPG11Q96JI7 SNORA59B-202ENST00000578183 701 ntBASIC-0.47□□□□□ -2.48
SPG11Q96JI7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.47□□□□□ -2.48
SPG11Q96JI7 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 RNU4-84P-201ENST00000364200 139 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 SNORD83B-201ENST00000386745 93 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AL079342.2-201ENST00000403367 482 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 RNU2-23P-201ENST00000410545 195 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AC092685.1-201ENST00000447960 1243 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AL163973.1-201ENST00000484753 577 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.47□□□□□ -2.49
SPG11Q96JI7 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.47□□□□□ -2.49
SPG11Q96JI7 VN1R83P-201ENST00000595685 445 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AC015726.2-201ENST00000620112 122 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AC104985.3-201ENST00000623479 597 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 AC104820.1-201ENST00000624183 307 ntBASIC-0.47□□□□□ -2.49
SPG11Q96JI7 CBX3P9-201ENST00000402326 552 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 MTCO3P1-205ENST00000422088 832 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
SPG11Q96JI7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPG11Q96JI7 MTATP6P30-201ENST00000443540 664 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC002381.1-201ENST00000447049 280 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC005042.3-201ENST00000453230 174 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC116655.1-201ENST00000508324 901 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 RNU1-86P-201ENST00000516108 154 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 RNU6-977P-201ENST00000516411 103 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 RNU1-107P-201ENST00000516617 154 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AP001981.2-201ENST00000603241 418 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC011374.2-201ENST00000607135 526 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AL136317.1-201ENST00000612653 226 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC106754.2-201ENST00000623006 233 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC098679.4-201ENST00000624241 654 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AP000568.1-201ENST00000282964 442 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 MIR340-201ENST00000362125 95 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 MIR653-201ENST00000385279 96 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC002486.1-201ENST00000435098 391 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 MTND2P33-201ENST00000506452 1031 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AK6P2-201ENST00000549020 471 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.48□□□□□ -2.49
SPG11Q96JI7 MIR548AO-201ENST00000579992 96 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 BNIP3P30-201ENST00000601184 574 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AL929325.1-201ENST00000603096 117 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AL034555.1-201ENST00000604816 211 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 AC009268.2-201ENST00000621925 457 ntBASIC-0.48□□□□□ -2.49
SPG11Q96JI7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
SPG11Q96JI7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
SPG11Q96JI7 PCNPP3-201ENST00000393579 471 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AC010385.1-201ENST00000412374 256 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 MTCO1P20-201ENST00000425366 358 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AC010153.1-201ENST00000432862 727 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.49□□□□□ -2.49
SPG11Q96JI7 HMGN3P1-201ENST00000453847 193 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AC034229.4-201ENST00000607861 441 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 SNORD111-201ENST00000408139 94 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 MTCO1P5-201ENST00000433573 344 ntBASIC-0.49□□□□□ -2.49
SPG11Q96JI7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms