Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 RNU6-325P-201ENST00000411132 105 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 AC060773.1-201ENST00000421698 310 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 MTCO3P29-201ENST00000432119 779 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.72□□□□□ -2.13
VMP1Q96GC9 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.72□□□□□ -2.13
VMP1Q96GC9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.72□□□□□ -2.13
VMP1Q96GC9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.72□□□□□ -2.13
VMP1Q96GC9 AC114982.1-201ENST00000469402 321 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.72□□□□□ -2.13
VMP1Q96GC9 AC011406.1-201ENST00000512440 370 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 RNU6-405P-201ENST00000516637 110 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 RNU6-835P-201ENST00000516974 104 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VMP1Q96GC9 MIR3976-201ENST00000606807 139 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 AC068792.1-201ENST00000621354 417 ntBASIC1.72□□□□□ -2.13
VMP1Q96GC9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
VMP1Q96GC9 BX322639.1-202ENST00000423987 2213 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 Y_RNA.51-201ENST00000362725 102 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 RNU6-933P-201ENST00000384424 107 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 MIR521-1-201ENST00000384902 87 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 AL117342.1-201ENST00000404861 406 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.71□□□□□ -2.14
VMP1Q96GC9 AC069257.2-201ENST00000441819 155 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.71□□□□□ -2.14
VMP1Q96GC9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.71□□□□□ -2.14
VMP1Q96GC9 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 RRN3P3-201ENST00000549207 578 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 AC100830.2-201ENST00000581636 240 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 NBR2-204ENST00000587322 63 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 AP001485.1-201ENST00000604799 199 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 MIR8076-201ENST00000611401 83 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 RMST_3.1-201ENST00000611651 109 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 OR5AK4P-201ENST00000635912 903 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 AC100821.1-201ENST00000523153 2479 ntBASIC1.71□□□□□ -2.14
VMP1Q96GC9 ICE2P2-201ENST00000483823 2787 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 CST2P1-201ENST00000425770 87 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 AC007677.1-201ENST00000445757 515 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 Z83846.1-201ENST00000446798 265 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 MTND1P29-201ENST00000448112 647 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 HMGN2P9-201ENST00000476875 229 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 MTCO1P29-201ENST00000496868 288 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 RNU6-1332P-201ENST00000516666 104 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 AK6P1-201ENST00000540219 478 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
VMP1Q96GC9 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.7□□□□□ -2.14
VMP1Q96GC9 SNRPGP20-201ENST00000604477 205 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 AC126177.8-201ENST00000618339 1015 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 MIR8063-201ENST00000621930 81 ntBASIC1.7□□□□□ -2.14
VMP1Q96GC9 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 MTCO3P40-201ENST00000392516 676 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 RNU6-648P-201ENST00000410190 107 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 RN7SKP51-201ENST00000410781 304 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.69□□□□□ -2.14
VMP1Q96GC9 AL591806.2-201ENST00000433122 173 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 AC009237.7-201ENST00000447357 229 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 AC245517.4-201ENST00000448601 281 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 NFU1P2-201ENST00000448700 469 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 OR2AQ1P-201ENST00000451972 200 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 snoU13.23-201ENST00000458863 104 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.69□□□□□ -2.14
VMP1Q96GC9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.69□□□□□ -2.14
VMP1Q96GC9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.69□□□□□ -2.14
VMP1Q96GC9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.69□□□□□ -2.14
VMP1Q96GC9 CPDP1-201ENST00000579660 283 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 AL353149.1-201ENST00000610667 244 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.69□□□□□ -2.14
VMP1Q96GC9 AC137590.2-201ENST00000619709 240 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 AC124864.2-201ENST00000624736 186 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 AL161722.3-201ENST00000605789 2983 ntBASIC1.69□□□□□ -2.14
VMP1Q96GC9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
VMP1Q96GC9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VMP1Q96GC9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
VMP1Q96GC9 RNU6-975P-201ENST00000384296 105 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 RNU6-1235P-201ENST00000384559 107 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 MIR514A2-201ENST00000385131 88 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 MIR514A3-201ENST00000385132 88 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 MIR450B-201ENST00000401182 78 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 MIR320B2-201ENST00000408479 138 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 RNU2-66P-201ENST00000410650 161 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.68□□□□□ -2.14
VMP1Q96GC9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.68□□□□□ -2.14
VMP1Q96GC9 MTND2P22-201ENST00000444325 1033 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 AC074290.1-201ENST00000448883 135 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 MTCO3P8-201ENST00000453691 755 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 RPS29P23-201ENST00000458635 123 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 RNU6-498P-201ENST00000459468 107 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 AC007215.1-201ENST00000464893 276 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 RPS26P55-201ENST00000471178 356 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.68□□□□□ -2.14
VMP1Q96GC9 RNA5SP445-201ENST00000515889 115 ntBASIC1.68□□□□□ -2.14
VMP1Q96GC9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.68□□□□□ -2.14
VMP1Q96GC9 AC026371.1-201ENST00000551867 419 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms