Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CR383656.8-201ENST00000549046 145 ntBASIC3.56□□□□□ -1.84
DDX11Q96FC9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.56□□□□□ -1.84
DDX11Q96FC9 MIR5571-201ENST00000577998 113 ntBASIC3.56□□□□□ -1.84
DDX11Q96FC9 AC024581.2-201ENST00000619986 252 ntBASIC3.56□□□□□ -1.84
DDX11Q96FC9 AC007318.2-201ENST00000620999 243 ntBASIC3.56□□□□□ -1.84
DDX11Q96FC9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
DDX11Q96FC9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
DDX11Q96FC9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DDX11Q96FC9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
DDX11Q96FC9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX11Q96FC9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
DDX11Q96FC9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
DDX11Q96FC9 MIR22-201ENST00000362190 85 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 RNU6-961P-201ENST00000363893 105 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 Y_RNA.275-201ENST00000364726 110 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 SNORD113-1-201ENST00000365321 69 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 RNU6-198P-201ENST00000384258 104 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 Y_RNA.569-201ENST00000384749 103 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX11Q96FC9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX11Q96FC9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.55□□□□□ -1.84
DDX11Q96FC9 snoU13.6-201ENST00000458785 104 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 SNORD116-28-201ENST00000516123 91 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 RNU6-861P-201ENST00000516745 106 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 MIR5695-201ENST00000579717 85 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 AL033523.1-201ENST00000605153 153 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.55□□□□□ -1.84
DDX11Q96FC9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.55□□□□□ -1.84
DDX11Q96FC9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.55□□□□□ -1.84
DDX11Q96FC9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX11Q96FC9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC135776.4-201ENST00000624300 1904 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC073325.2-201ENST00000339545 159 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.82-201ENST00000363000 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.92-201ENST00000363043 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.235-201ENST00000364412 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.306-201ENST00000365015 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.312-201ENST00000365089 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.319-201ENST00000365138 92 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.322-201ENST00000365151 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 RNU6-142P-201ENST00000384019 107 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 RNU6-1145P-201ENST00000384246 107 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.570-201ENST00000384750 101 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 MIR544A-201ENST00000384855 91 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 MIR329-1-201ENST00000385028 80 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 RNU6-159P-201ENST00000391080 106 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 RNU6-1245P-201ENST00000411130 106 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 MTATP6P29-201ENST00000415057 132 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.650-201ENST00000459002 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC091179.1-201ENST00000461606 579 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC074198.2-201ENST00000508153 258 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 RNU6-567P-201ENST00000516746 107 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.777-201ENST00000516982 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.771-201ENST00000598668 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AL133393.1-201ENST00000603277 287 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC072026.1-201ENST00000605023 201 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AL357075.2-201ENST00000614906 189 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AC005296.1-201ENST00000616145 209 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 AL590240.4-201ENST00000616908 390 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 Y_RNA.789-201ENST00000622480 102 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.54□□□□□ -1.84
DDX11Q96FC9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.54□□□□□ -1.84
DDX11Q96FC9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
DDX11Q96FC9 UBE2WP1-201ENST00000362030 340 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 SNORD115-8-201ENST00000363856 82 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 SNORD115-38-201ENST00000365037 82 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 CD24P4-201ENST00000382840 243 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 RNU6-47P-201ENST00000383866 107 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 SNORA54-201ENST00000384281 123 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 RNU6-541P-201ENST00000384709 110 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 MIR888-201ENST00000401186 77 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 RNA5SP344-201ENST00000411081 104 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX11Q96FC9 RPL37P4-201ENST00000448908 268 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 RPL23AP3-201ENST00000453844 468 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.53□□□□□ -1.84
DDX11Q96FC9 RNU6-58P-201ENST00000517143 103 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 AC019159.1-201ENST00000605094 187 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 AC037487.3-201ENST00000606668 112 ntBASIC3.53□□□□□ -1.84
DDX11Q96FC9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.53□□□□□ -1.84
DDX11Q96FC9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DDX11Q96FC9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
DDX11Q96FC9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.53□□□□□ -1.85
DDX11Q96FC9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
DDX11Q96FC9 HAUS6P2-201ENST00000433254 2404 ntBASIC3.52□□□□□ -1.85
DDX11Q96FC9 RNU6-1159P-201ENST00000362933 107 ntBASIC3.52□□□□□ -1.85
DDX11Q96FC9 RNU6-626P-201ENST00000363354 107 ntBASIC3.52□□□□□ -1.85
DDX11Q96FC9 Y_RNA.230-201ENST00000364348 109 ntBASIC3.52□□□□□ -1.85
DDX11Q96FC9 Y_RNA.446-201ENST00000384178 104 ntBASIC3.52□□□□□ -1.85
DDX11Q96FC9 RNU6-21P-201ENST00000384710 107 ntBASIC3.52□□□□□ -1.85
DDX11Q96FC9 AL390729.2-201ENST00000416137 156 ntBASIC3.52□□□□□ -1.85
DDX11Q96FC9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.52□□□□□ -1.85
DDX11Q96FC9 MTCO1P5-201ENST00000433573 344 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms