Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC018462.2-201ENST00000605375 395 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 AC046143.2-201ENST00000609789 160 ntBASIC2□□□□□ -2.09
RFT1Q96AA3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2□□□□□ -2.09
RFT1Q96AA3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
RFT1Q96AA3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
RFT1Q96AA3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RFT1Q96AA3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RFT1Q96AA3 RNU6-1115P-201ENST00000362490 106 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 Y_RNA.162-201ENST00000363683 102 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 Y_RNA.187-201ENST00000363918 113 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 SNORA22B-201ENST00000383876 138 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 Y_RNA.496-201ENST00000384444 101 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 RNU6-1050P-201ENST00000410388 107 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.99□□□□□ -2.09
RFT1Q96AA3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.99□□□□□ -2.09
RFT1Q96AA3 RNU6-717P-201ENST00000459076 104 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 RPL9P9-202ENST00000466501 579 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 AC114801.2-201ENST00000503825 781 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 AC234781.5-201ENST00000508429 271 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 AC096745.1-201ENST00000509945 370 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 PTP4A1P4-201ENST00000512479 322 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 RNU6-965P-201ENST00000516721 96 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 RNU6-567P-201ENST00000516746 107 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 RNU2-19P-201ENST00000517288 84 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.99□□□□□ -2.09
RFT1Q96AA3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.99□□□□□ -2.09
RFT1Q96AA3 CYP4A27P-201ENST00000567218 190 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 CPDP1-201ENST00000579660 283 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 AL133215.3-201ENST00000609801 448 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 AC005520.5-201ENST00000613926 164 ntBASIC1.99□□□□□ -2.09
RFT1Q96AA3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.99□□□□□ -2.09
RFT1Q96AA3 Y_RNA.146-201ENST00000363549 102 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 Y_RNA.197-201ENST00000364004 102 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 Y_RNA.445-201ENST00000384168 102 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 SNORA40.19-201ENST00000390846 128 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AL590004.1-201ENST00000405321 300 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 MIR1294-201ENST00000408503 142 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AL030996.1-201ENST00000411430 235 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.98□□□□□ -2.09
RFT1Q96AA3 SNORD5.1-201ENST00000458800 75 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 Y_RNA.653-201ENST00000459091 95 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 Y_RNA.631-201ENST00000459607 101 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AC107032.1-201ENST00000485945 480 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AC104564.1-201ENST00000493028 407 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AC097473.1-201ENST00000508142 408 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 RNU6-1170P-201ENST00000515974 106 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 SCARNA16.2-201ENST00000516520 172 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 MIR4529-201ENST00000578110 78 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 MIR3923-201ENST00000579521 83 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RFT1Q96AA3 AC103810.6-201ENST00000606708 136 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 AC116312.1-201ENST00000606841 314 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 MIR1248-201ENST00000629190 106 ntBASIC1.98□□□□□ -2.09
RFT1Q96AA3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFT1Q96AA3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFT1Q96AA3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.98□□□□□ -2.09
RFT1Q96AA3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC009541.1-201ENST00000438279 2662 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 Y_RNA.48-201ENST00000362710 103 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 Y_RNA.128-201ENST00000363391 112 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 SNORA36A-201ENST00000384221 132 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 MIR606-201ENST00000384851 96 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 MIR517A-201ENST00000385001 87 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 SNORA12-201ENST00000391162 147 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 MIR1262-201ENST00000408276 93 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 RNU6-325P-201ENST00000411132 105 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC113618.1-201ENST00000416747 285 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 AL645568.3-201ENST00000433683 316 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 RNA5SP233-201ENST00000459153 113 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC132942.1-201ENST00000486753 483 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 ANXA2P1-201ENST00000505539 926 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC008413.1-201ENST00000511864 177 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 Y_RNA.661-201ENST00000516003 99 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 RNU6-1046P-201ENST00000516538 107 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 MIR3976-201ENST00000606807 139 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC019193.3-201ENST00000609144 554 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 PCGEM1.1-201ENST00000613431 131 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 AC007485.1-201ENST00000616755 206 ntBASIC1.97□□□□□ -2.09
RFT1Q96AA3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RFT1Q96AA3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RFT1Q96AA3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms