Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AC018630.3-201ENST00000542637 96 ntBASIC3.59□□□□□ -1.83
RNF34Q969K3 MIR3616-201ENST00000584070 92 ntBASIC3.59□□□□□ -1.83
RNF34Q969K3 AC004467.1-201ENST00000615678 330 ntBASIC3.59□□□□□ -1.83
RNF34Q969K3 AC022149.2-201ENST00000621061 203 ntBASIC3.59□□□□□ -1.83
RNF34Q969K3 AC006001.4-201ENST00000622243 395 ntBASIC3.59□□□□□ -1.83
RNF34Q969K3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
RNF34Q969K3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNF34Q969K3 AC138915.1-201ENST00000565427 1685 ntBASIC3.59□□□□□ -1.84
RNF34Q969K3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
RNF34Q969K3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF34Q969K3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF34Q969K3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF34Q969K3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RNF34Q969K3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF34Q969K3 Y_RNA.76-201ENST00000362931 109 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 Y_RNA.297-201ENST00000364950 91 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 Y_RNA.331-201ENST00000365267 102 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 RNU6-1264P-201ENST00000383891 107 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 Y_RNA.446-201ENST00000384178 104 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 SNORD17-201ENST00000390930 237 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 SNORA53-201ENST00000391141 249 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF34Q969K3 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF34Q969K3 MRPS10P1-201ENST00000448483 130 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 RNU7-14P-201ENST00000459331 62 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 RPL23AP67-201ENST00000465341 474 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF34Q969K3 FCF1P8-201ENST00000510322 597 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 RNU2-31P-201ENST00000516954 155 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.58□□□□□ -1.84
RNF34Q969K3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF34Q969K3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RNF34Q969K3 MFSD8-233ENST00000641482 4860 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF34Q969K3 Z82209.1-201ENST00000422141 2135 ntBASIC3.58□□□□□ -1.84
RNF34Q969K3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF34Q969K3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RNF34Q969K3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 RNU6-461P-201ENST00000364195 107 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 RNU6-234P-201ENST00000365229 104 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 MIR34B-201ENST00000385076 84 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 RNA5SP504-201ENST00000410676 117 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 RNU2-63P-201ENST00000410792 194 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 RNU6-651P-201ENST00000411040 105 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 AL139156.1-201ENST00000412785 841 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF34Q969K3 AC002075.2-201ENST00000425207 252 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 PIGPP3-201ENST00000425307 415 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 SUMO1P2-201ENST00000452524 304 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 AC005042.3-201ENST00000453230 174 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 PRELID3BP1-201ENST00000457142 540 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 AC091153.1-201ENST00000466297 402 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 SNORA81.3-201ENST00000517283 198 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RNF34Q969K3 AC008749.1-201ENST00000597650 306 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 AC022441.3-201ENST00000605737 136 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 AC037487.3-201ENST00000606668 112 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RNF34Q969K3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF34Q969K3 AC091932.3-201ENST00000624223 323 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 U6.105-201ENST00000637379 88 ntBASIC3.57□□□□□ -1.84
RNF34Q969K3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RNF34Q969K3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF34Q969K3 AL513302.2-201ENST00000562313 1842 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF34Q969K3 MIR410-201ENST00000362222 80 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 Y_RNA.117-201ENST00000363294 101 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 RNU6-1305P-201ENST00000364353 104 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 RNU6-740P-201ENST00000364734 105 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 RNU6-326P-201ENST00000365480 107 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 SNORA67.2-201ENST00000384300 149 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 MIR183-201ENST00000384958 110 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 MIR1298-201ENST00000408783 112 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 RPL19P1-201ENST00000411635 428 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF34Q969K3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 RPS29P31-201ENST00000446147 164 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF34Q969K3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF34Q969K3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF34Q969K3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.56□□□□□ -1.84
RNF34Q969K3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.56□□□□□ -1.84
RNF34Q969K3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF34Q969K3 RPL21P9-201ENST00000556149 474 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 AC008873.1-201ENST00000625051 138 ntBASIC3.56□□□□□ -1.84
RNF34Q969K3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF34Q969K3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF34Q969K3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF34Q969K3 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 U3.8-201ENST00000363675 217 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 Y_RNA.200-201ENST00000364018 102 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF34Q969K3 RNU6-546P-201ENST00000383991 107 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 Y_RNA.418-201ENST00000384029 102 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 RNU4-70P-201ENST00000384579 139 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 MIR490-201ENST00000384865 128 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 MIR586-201ENST00000385035 97 ntBASIC3.55□□□□□ -1.84
RNF34Q969K3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms