Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RNU6-498P-201ENST00000459468 107 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 AC007215.1-201ENST00000464893 276 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 AC083904.1-201ENST00000487828 231 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 AC019235.1-201ENST00000503847 207 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.69□□□□□ -2.14
PTP4A1Q93096 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 RNU1-41P-201ENST00000516161 162 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 RNU6-1041P-201ENST00000516254 102 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 RNU1-48P-201ENST00000516400 162 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 RNU6-1198P-201ENST00000516904 67 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
PTP4A1Q93096 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.69□□□□□ -2.14
PTP4A1Q93096 AL353149.1-201ENST00000610667 244 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 AC013412.1-201ENST00000610687 192 ntBASIC1.69□□□□□ -2.14
PTP4A1Q93096 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.69□□□□□ -2.14
PTP4A1Q93096 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.69□□□□□ -2.14
PTP4A1Q93096 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.69□□□□□ -2.14
PTP4A1Q93096 Y_RNA.167-201ENST00000363735 109 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 RNU6-522P-201ENST00000364497 107 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 Y_RNA.373-201ENST00000365600 103 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 RNU6-418P-201ENST00000384035 107 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 RNU6-296P-201ENST00000384608 107 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 MIR515-2-201ENST00000384883 83 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 MIR515-1-201ENST00000384884 83 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 MTCO1P20-201ENST00000425366 358 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 CST2P1-201ENST00000425770 87 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.68□□□□□ -2.14
PTP4A1Q93096 MTND3P21-201ENST00000433774 331 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.68□□□□□ -2.14
PTP4A1Q93096 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.68□□□□□ -2.14
PTP4A1Q93096 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.68□□□□□ -2.14
PTP4A1Q93096 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.68□□□□□ -2.14
PTP4A1Q93096 PPP1R2P5-201ENST00000457256 603 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 AC011406.1-201ENST00000512440 370 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 RNA5SP54-201ENST00000516951 92 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 RRN3P3-201ENST00000549207 578 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 AL133215.3-201ENST00000609801 448 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 RMST_3.1-201ENST00000611651 109 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 AC048344.4-201ENST00000619744 527 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PTP4A1Q93096 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
PTP4A1Q93096 BX322639.1-202ENST00000423987 2213 ntBASIC1.68□□□□□ -2.14
PTP4A1Q93096 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PTP4A1Q93096 RNU6-254P-201ENST00000363377 107 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 RNU6-439P-201ENST00000384188 106 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
PTP4A1Q93096 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.67□□□□□ -2.14
PTP4A1Q93096 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 JTBP1-201ENST00000441314 247 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 MTND2P22-201ENST00000444325 1033 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 PCMTD1P1-201ENST00000455560 355 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 RNU6-970P-201ENST00000516312 107 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 AC010525.2-201ENST00000590920 195 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 FAM157A-202ENST00000615155 405 ntBASIC1.67□□□□□ -2.14
PTP4A1Q93096 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
PTP4A1Q93096 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PTP4A1Q93096 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
PTP4A1Q93096 SNORD33-201ENST00000362761 85 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.66□□□□□ -2.14
PTP4A1Q93096 RNU6-483P-201ENST00000384088 108 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 RNU6-975P-201ENST00000384296 105 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 Y_RNA.530-201ENST00000384587 101 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.66□□□□□ -2.14
PTP4A1Q93096 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.66□□□□□ -2.14
PTP4A1Q93096 AC099677.2-201ENST00000436385 175 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.66□□□□□ -2.14
PTP4A1Q93096 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 DEFB131C-201ENST00000528817 165 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 AC245505.1-201ENST00000556398 224 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 MIR3945-201ENST00000581853 98 ntBASIC1.66□□□□□ -2.14
PTP4A1Q93096 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
PTP4A1Q93096 SNORD114-1-201ENST00000362705 72 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 Y_RNA.194-201ENST00000363985 102 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 MIR586-201ENST00000385035 97 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 AL079342.1-201ENST00000401460 267 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 ZNF885P-201ENST00000420174 1098 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 C8orf59P1-201ENST00000429930 303 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 snoU13.30-201ENST00000458951 104 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 RPL26P26-201ENST00000480251 434 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.65□□□□□ -2.15
PTP4A1Q93096 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 AC016957.1-201ENST00000534895 309 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 AC084364.2-201ENST00000546924 395 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.65□□□□□ -2.15
PTP4A1Q93096 ZNF519P2-201ENST00000557032 169 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 POLR3GP2-201ENST00000588366 668 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 MIR1321-201ENST00000637766 79 ntBASIC1.65□□□□□ -2.15
PTP4A1Q93096 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PTP4A1Q93096 Y_RNA.100-201ENST00000363141 102 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 RNU6-1305P-201ENST00000364353 104 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AL590002.1-201ENST00000406554 418 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 MIR1253-201ENST00000408273 105 ntBASIC1.64□□□□□ -2.15
PTP4A1Q93096 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms