Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RNU5E-10P-201ENST00000363506 118 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 RNU4-68P-201ENST00000364314 141 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 RNU6-39P-201ENST00000384344 107 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 RNU6-1026P-201ENST00000384465 108 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 RNU6-30P-201ENST00000384561 107 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 MIR100-201ENST00000385259 80 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 RNU6-910P-201ENST00000390844 107 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 RNU6-1054P-201ENST00000411293 104 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 GTF2IP13-201ENST00000438487 386 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.53□□□□□ -2.33
TOPBP1Q92547 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
TOPBP1Q92547 MTND4LP18-201ENST00000526864 291 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.53□□□□□ -2.33
TOPBP1Q92547 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.53□□□□□ -2.33
TOPBP1Q92547 MIR5190-201ENST00000581537 80 ntBASIC0.53□□□□□ -2.33
TOPBP1Q92547 RNU4-92P-201ENST00000363783 136 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 MIR558-201ENST00000384920 94 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 MIR10B-201ENST00000385011 110 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 SNORD115.1-201ENST00000391109 76 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 MRPL42P2-201ENST00000403169 426 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 RPL23AP95-201ENST00000426806 265 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 AC119618.1-201ENST00000434191 222 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 USP9YP25-201ENST00000457708 443 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 AC007547.1-201ENST00000462177 490 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 HMGN1P12-201ENST00000499125 195 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 AC104136.1-201ENST00000512969 394 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 SNORA31.4-201ENST00000516049 129 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.52□□□□□ -2.33
TOPBP1Q92547 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.52□□□□□ -2.33
TOPBP1Q92547 AC090517.1-201ENST00000569307 266 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 MTCO2P2-201ENST00000591258 225 ntBASIC0.52□□□□□ -2.33
TOPBP1Q92547 RNU6-1123P-201ENST00000362347 106 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 RNA5SP368-201ENST00000364298 116 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 RNU6-641P-201ENST00000384006 107 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC007283.2-201ENST00000424739 197 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC002429.1-201ENST00000437672 148 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC048334.1-201ENST00000477975 159 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 AL163973.1-201ENST00000484753 577 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.51□□□□□ -2.33
TOPBP1Q92547 HSPE1P23-201ENST00000509838 286 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 MTND2P31-201ENST00000512602 616 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC090142.3-201ENST00000519012 385 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 TMF1P1-201ENST00000576058 373 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 BNIP3P16-201ENST00000589779 534 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC022432.1-201ENST00000595739 310 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 AC073539.2-201ENST00000597113 165 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 CTHRC1P1-201ENST00000605383 469 ntBASIC0.51□□□□□ -2.33
TOPBP1Q92547 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.51□□□□□ -2.33
TOPBP1Q92547 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
TOPBP1Q92547 RNU6-428P-201ENST00000362942 107 ntBASIC0.5□□□□□ -2.33
TOPBP1Q92547 Y_RNA.97-201ENST00000363094 102 ntBASIC0.5□□□□□ -2.33
TOPBP1Q92547 Y_RNA.302-201ENST00000364997 102 ntBASIC0.5□□□□□ -2.33
TOPBP1Q92547 RNU6-809P-201ENST00000384461 107 ntBASIC0.5□□□□□ -2.33
TOPBP1Q92547 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
TOPBP1Q92547 MTCYBP36-201ENST00000404146 440 ntBASIC0.5□□□□□ -2.33
TOPBP1Q92547 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.5□□□□□ -2.33
TOPBP1Q92547 RPL39P38-201ENST00000467018 153 ntBASIC0.5□□□□□ -2.33
TOPBP1Q92547 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.5□□□□□ -2.33
TOPBP1Q92547 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.5□□□□□ -2.33
TOPBP1Q92547 AC078795.3-201ENST00000602913 472 ntBASIC0.5□□□□□ -2.33
TOPBP1Q92547 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
TOPBP1Q92547 RNU4-1-201ENST00000363925 141 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 RNU6-116P-201ENST00000384042 109 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
TOPBP1Q92547 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.49□□□□□ -2.33
TOPBP1Q92547 RAB28P5-201ENST00000427490 651 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 AL133396.1-201ENST00000432048 687 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 MTCO2P29-201ENST00000465212 189 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 AC112204.1-201ENST00000502591 103 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 RNA5SP168-201ENST00000516642 112 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 RNU6-197P-201ENST00000516680 100 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 RNU6-856P-201ENST00000516959 98 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 AC109479.2-201ENST00000517842 174 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 AC105185.1-201ENST00000518705 535 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 AP003181.2-201ENST00000528941 181 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
TOPBP1Q92547 ZNF519P3-201ENST00000557158 1032 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 MIR4742-201ENST00000581069 85 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.49□□□□□ -2.33
TOPBP1Q92547 Pinc.1-201ENST00000616452 154 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
TOPBP1Q92547 AC092268.1-201ENST00000342691 405 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 AC063976.4-201ENST00000421971 163 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.48□□□□□ -2.33
TOPBP1Q92547 RNU7-34P-201ENST00000459394 64 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 PDCD5P2-201ENST00000507570 312 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 SNORA31.2-201ENST00000516019 134 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 RNU6-948P-201ENST00000516374 107 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 AC025423.5-201ENST00000550230 219 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 AL353149.1-201ENST00000610667 244 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 AL139418.1-201ENST00000613613 177 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 BX322639.1-202ENST00000423987 2213 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 Y_RNA.124-201ENST00000363339 93 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 SNORD32A-201ENST00000364805 84 ntBASIC0.48□□□□□ -2.33
TOPBP1Q92547 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 575.7 ms