Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 Y_RNA.221-201ENST00000364248 96 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 Y_RNA.466-201ENST00000384294 113 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 MIR590-201ENST00000385008 97 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 AC099548.1-201ENST00000421443 426 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 HMGN2P30-201ENST00000423237 256 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 AF228730.3-201ENST00000436691 102 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 AC012308.1-201ENST00000451232 178 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 SRIP1-201ENST00000489235 288 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 RPL30P5-201ENST00000494923 336 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 AIG1P1-201ENST00000503376 148 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 ATP5EP1-201ENST00000510257 156 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 RNU1-95P-201ENST00000516357 160 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-109P-201ENST00000516364 107 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 SNORA18.4-201ENST00000516440 124 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-184P-201ENST00000516514 107 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-113P-201ENST00000516653 101 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 RNU1-128P-201ENST00000516704 160 ntBASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.73□□□□□ -1.65
NKX2-3Q8TAU0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 RNY1P10-201ENST00000363268 113 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 RNU4-41P-201ENST00000364426 143 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 Y_RNA.634-201ENST00000364811 113 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-1280P-201ENST00000365211 107 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 DYNLT3P1-201ENST00000378574 347 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 RNU2-70P-201ENST00000410718 179 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 RNA5SP127-201ENST00000411051 133 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 CYCSP30-201ENST00000546447 172 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 AC025627.2-201ENST00000576220 160 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 AC018692.3-201ENST00000623929 123 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 ZNF720P1-201ENST00000562403 1939 ntBASIC4.72□□□□□ -1.65
NKX2-3Q8TAU0 AC139713.2-215ENST00000641428 5037 ntBASIC4.71□□□□□ -1.65
NKX2-3Q8TAU0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.71□□□□□ -1.65
NKX2-3Q8TAU0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 RNU6-217P-201ENST00000384164 104 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 SNORA67.2-201ENST00000384300 149 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 MIR607-201ENST00000385241 96 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 EI24P2-201ENST00000397776 1076 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 RN7SKP156-201ENST00000410308 342 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 PPIAP15-201ENST00000479662 484 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 SCARNA14-201ENST00000516903 136 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 AC091167.4-201ENST00000605079 184 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 AC093732.2-201ENST00000607950 274 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 PCGEM1.1-201ENST00000613431 131 ntBASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NKX2-3Q8TAU0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 SNORA63.5-201ENST00000363548 123 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 RNU6-1134P-201ENST00000365156 101 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 SNORA26-201ENST00000391286 122 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 MIR1255A-201ENST00000408338 113 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 RPL23AP82-202ENST00000427528 469 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 RPL23AP7-203ENST00000449021 469 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 CENPBD1P1-201ENST00000464061 469 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 RPL23AP54-201ENST00000495129 419 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 RNU6-365P-201ENST00000517113 106 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 RNA5SP179-201ENST00000517284 121 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 LINC00901.1-201ENST00000617252 152 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 AL035470.1-201ENST00000622571 220 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 MAPK10-372ENST00000641954 3413 ntBASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
NKX2-3Q8TAU0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 Y_RNA.244-201ENST00000364484 109 ntBASIC4.69□□□□□ -1.66
NKX2-3Q8TAU0 SNORA5A-201ENST00000384111 134 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms