Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 MRPS36P2-201ENST00000512569 299 ntBASIC3.61□□□□□ -1.83
PHC3Q8NDX5 RNU6-579P-201ENST00000516879 102 ntBASIC3.61□□□□□ -1.83
PHC3Q8NDX5 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.61□□□□□ -1.83
PHC3Q8NDX5 AC087441.2-201ENST00000529141 262 ntBASIC3.61□□□□□ -1.83
PHC3Q8NDX5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.61□□□□□ -1.83
PHC3Q8NDX5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PHC3Q8NDX5 AL513302.2-201ENST00000562313 1842 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHC3Q8NDX5 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 SNORD32B-201ENST00000364460 84 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 Y_RNA.262-201ENST00000364641 102 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 RNA5SP51-201ENST00000364750 119 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 SNORA62.3-201ENST00000365110 153 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AL359837.1-201ENST00000381357 287 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 PTMAP2-201ENST00000397627 327 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 RNA5SP504-201ENST00000410676 117 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 YME1L1P1-201ENST00000429435 297 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AC109925.1-201ENST00000478069 331 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 SRIP1-201ENST00000489235 288 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.6□□□□□ -1.83
PHC3Q8NDX5 RNU1-95P-201ENST00000516357 160 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 RNU1-128P-201ENST00000516704 160 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AC009127.3-201ENST00000570531 403 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AC008873.1-201ENST00000625051 138 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AC012442.3-202ENST00000636742 206 ntBASIC3.6□□□□□ -1.83
PHC3Q8NDX5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PHC3Q8NDX5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PHC3Q8NDX5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PHC3Q8NDX5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PHC3Q8NDX5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.59□□□□□ -1.83
PHC3Q8NDX5 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.59□□□□□ -1.83
PHC3Q8NDX5 RNU6-454P-201ENST00000364292 107 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 SNORA73.2-201ENST00000364946 201 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 PCNPP3-201ENST00000393579 471 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 RBMY2UP-201ENST00000453474 324 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 AC140059.1-201ENST00000489238 361 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 RNU6-436P-201ENST00000516171 114 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 RNU5F-4P-201ENST00000516581 114 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.59□□□□□ -1.83
PHC3Q8NDX5 MIR3158-1-201ENST00000583596 81 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 MIR7851-201ENST00000610611 160 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 snoU18.1-201ENST00000629629 71 ntBASIC3.59□□□□□ -1.83
PHC3Q8NDX5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.59□□□□□ -1.83
PHC3Q8NDX5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
PHC3Q8NDX5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PHC3Q8NDX5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
PHC3Q8NDX5 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 RNU6-1272P-201ENST00000362776 107 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 Y_RNA.304-201ENST00000365011 112 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 RNU6-47P-201ENST00000383866 107 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 RNU6-211P-201ENST00000384047 107 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AL133547.1-201ENST00000448546 220 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AC091153.1-201ENST00000466297 402 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 SNORA67.7-201ENST00000516664 135 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 RNU6-861P-201ENST00000516745 106 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AC107294.3-201ENST00000609211 526 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AP003355.3-201ENST00000623465 114 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 AC091564.4-201ENST00000533934 2194 ntBASIC3.58□□□□□ -1.84
PHC3Q8NDX5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PHC3Q8NDX5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.57□□□□□ -1.84
PHC3Q8NDX5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PHC3Q8NDX5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHC3Q8NDX5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHC3Q8NDX5 RNU6-682P-201ENST00000363843 106 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 RNU6-923P-201ENST00000364753 107 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
PHC3Q8NDX5 SNORA5A-201ENST00000384111 134 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 SNORA67.2-201ENST00000384300 149 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 MIR1294-201ENST00000408503 142 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 RNA5SP293-201ENST00000410527 113 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.57□□□□□ -1.84
PHC3Q8NDX5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PHC3Q8NDX5 BTF3P11-201ENST00000426582 477 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 RPS4XP2-201ENST00000458402 793 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 AC104619.4-201ENST00000510773 249 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 RAC1P5-201ENST00000512182 576 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 Y_RNA.662-201ENST00000516028 97 ntBASIC3.57□□□□□ -1.84
PHC3Q8NDX5 RN7SKP282-201ENST00000516824 299 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms