Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 CYCSP19-201ENST00000411715 316 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
DTX3Q8N9I9 RPS4XP2-201ENST00000458402 793 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 RN7SL323P-201ENST00000494712 295 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.13□□□□□ -1.91
DTX3Q8N9I9 RNU6-1219P-201ENST00000516143 112 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 HSPE1P18-201ENST00000517602 280 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 DEFB131C-201ENST00000528817 165 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 MIR5692C2-201ENST00000577959 77 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.13□□□□□ -1.91
DTX3Q8N9I9 AL008718.3-201ENST00000610217 321 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 uc_338.14-201ENST00000613162 166 ntBASIC3.13□□□□□ -1.91
DTX3Q8N9I9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.13□□□□□ -1.91
DTX3Q8N9I9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.13□□□□□ -1.91
DTX3Q8N9I9 AC069528.2-201ENST00000624849 1991 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 RNU6-653P-201ENST00000363074 106 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 RNU6-454P-201ENST00000364292 107 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AL357139.1-201ENST00000407792 426 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 U3.40-201ENST00000408706 208 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 RN7SKP156-201ENST00000410308 342 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC140059.1-201ENST00000489238 361 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 HMGB3P3-201ENST00000510526 400 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 RNU2-44P-201ENST00000516795 194 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 MRPS18CP4-201ENST00000535821 231 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC079598.5-201ENST00000547460 117 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC009127.3-201ENST00000570531 403 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
DTX3Q8N9I9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DTX3Q8N9I9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DTX3Q8N9I9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DTX3Q8N9I9 RNU1-75P-201ENST00000347264 129 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 SNORA73.2-201ENST00000364946 201 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
DTX3Q8N9I9 AL365496.1-201ENST00000426885 215 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 HMGN2P31-201ENST00000432430 273 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 GOT2P5-201ENST00000433995 546 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 RPS29P7-201ENST00000439662 171 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 SNORA84-201ENST00000459229 133 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 RNU6-436P-201ENST00000516171 114 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 RNU1-45P-201ENST00000517191 141 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.11□□□□□ -1.91
DTX3Q8N9I9 MIR5187-201ENST00000583479 76 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 MIR3158-1-201ENST00000583596 81 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 MIR7851-201ENST00000610611 160 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 AC104465.1-201ENST00000611365 139 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.11□□□□□ -1.91
DTX3Q8N9I9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.11□□□□□ -1.91
DTX3Q8N9I9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 Y_RNA.8-201ENST00000362353 102 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 RNU1-105P-201ENST00000363470 161 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 AL359837.1-201ENST00000381357 287 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 RNY1P5-201ENST00000383890 115 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 RNU6-804P-201ENST00000384286 107 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 U8.12-201ENST00000384701 133 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 RNA5SP504-201ENST00000410676 117 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 AC126124.2-201ENST00000413542 321 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 MIR3144-201ENST00000579460 79 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 AL670379.2-201ENST00000604983 252 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 AC006133.1-201ENST00000617106 264 ntBASIC3.1□□□□□ -1.91
DTX3Q8N9I9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
DTX3Q8N9I9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DTX3Q8N9I9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
DTX3Q8N9I9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.09□□□□□ -1.91
DTX3Q8N9I9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.09□□□□□ -1.91
DTX3Q8N9I9 SNORA12-201ENST00000391162 147 ntBASIC3.09□□□□□ -1.91
DTX3Q8N9I9 TOMM22P2-201ENST00000430735 237 ntBASIC3.09□□□□□ -1.91
DTX3Q8N9I9 TMSB4XP3-201ENST00000445144 114 ntBASIC3.09□□□□□ -1.91
DTX3Q8N9I9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.09□□□□□ -1.91
DTX3Q8N9I9 AC026333.2-201ENST00000542164 106 ntBASIC3.09□□□□□ -1.91
DTX3Q8N9I9 MIR92B-201ENST00000607575 96 ntBASIC3.09□□□□□ -1.91
DTX3Q8N9I9 CR392039.5-201ENST00000623201 510 ntBASIC3.09□□□□□ -1.91
DTX3Q8N9I9 AC132825.6-201ENST00000638861 357 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms