Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 HMGB3P8-201ENST00000449709 577 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORA59A-201ENST00000459326 152 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 RNU6-625P-201ENST00000459412 107 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.797-201ENST00000515977 94 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 SNORA31.8-201ENST00000516327 108 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC112693.2-201ENST00000556538 232 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC027309.3-201ENST00000623419 351 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC008873.1-201ENST00000625051 138 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC091152.2-201ENST00000591628 2569 ntBASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.27□□□□□ -1.89
TTC9BQ8N6N2 AC007496.3-201ENST00000624987 3443 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 SNORD32A-201ENST00000364805 84 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AL591034.1-201ENST00000407447 340 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 U3.37-201ENST00000408528 213 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.595-201ENST00000410403 105 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 RN7SKP220-201ENST00000410611 288 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 RNA5SP31-201ENST00000411144 127 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 GPM6BP3-201ENST00000442797 145 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 RPS20P10-201ENST00000451209 253 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 RN7SL330P-201ENST00000469709 307 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AP002001.1-203ENST00000534002 267 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 CYCSP39-201ENST00000565821 309 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 LARP7P3-201ENST00000579888 337 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 MIR4425-201ENST00000580572 84 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AC010999.1-201ENST00000611856 324 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AL137790.1-201ENST00000634283 177 ntBASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.26□□□□□ -1.89
TTC9BQ8N6N2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AL136164.4-201ENST00000625013 2135 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.111-201ENST00000363248 100 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 SNORA80A-201ENST00000363922 136 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RNU4-10P-201ENST00000364383 140 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 Z98749.2-208ENST00000381646 500 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RNU6-80P-201ENST00000384195 107 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 SNORD15B-201ENST00000384714 146 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 MIR325-201ENST00000385260 98 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RNU6-239P-201ENST00000390990 99 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 MIR513C-201ENST00000401352 84 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RPL30P13-201ENST00000418873 348 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 COTL1P1-201ENST00000422309 375 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 HMGN2P20-201ENST00000437531 273 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 U8.19-201ENST00000459095 133 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RPL23AP14-201ENST00000468281 468 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AL121594.1-201ENST00000475906 575 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RNU1-143P-201ENST00000516296 146 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RNA5SP291-201ENST00000517222 105 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AP004607.1-201ENST00000524456 203 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 HSPE1P4-201ENST00000550617 308 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 U1.23-201ENST00000610293 146 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AC004467.1-201ENST00000615678 330 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AC058791.1-201ENST00000608412 3198 ntBASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TTC9BQ8N6N2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC110491.1-201ENST00000562191 2010 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC002546.1-201ENST00000588041 2504 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC073325.2-201ENST00000339545 159 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 RNU6-275P-201ENST00000364910 107 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 RNU6-142P-201ENST00000384019 107 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 U3.26-201ENST00000391236 204 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 YPEL5P1-201ENST00000419731 367 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AL356867.1-201ENST00000429623 299 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms