Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MIR1278-201ENST00000408753 81 ntBASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 RNU6-383P-201ENST00000410864 94 ntBASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 AL135786.1-201ENST00000415892 214 ntBASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 RPS27P1-201ENST00000450552 247 ntBASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 MRPS36P2-201ENST00000512569 299 ntBASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 RNA5SP20-201ENST00000515976 84 ntBASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.96□□□□□ -1.78
DEPDC4Q8N2C3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 Y_RNA.420-201ENST00000384043 110 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 MIR3074-201ENST00000384885 81 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 SNORA57.1-201ENST00000391227 145 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 RNU6-57P-201ENST00000411348 103 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 RN7SKP101-201ENST00000411376 320 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 RNU6-437P-201ENST00000459408 95 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 MIR6716-201ENST00000613413 80 ntBASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
DEPDC4Q8N2C3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 AC007256.1-201ENST00000392253 2765 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 Y_RNA.273-201ENST00000364703 102 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 SNORD116-14-201ENST00000383894 92 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 SNORD116-17-201ENST00000383929 92 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 Y_RNA.393-201ENST00000383936 102 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 SNORD14D-201ENST00000384390 87 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 SNORD116-15-201ENST00000384445 92 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 SNORD116-19-201ENST00000384729 92 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 AL512604.1-201ENST00000404812 257 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 SNORA3C-201ENST00000408792 125 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 AL356387.2-201ENST00000422272 243 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 U3.44-201ENST00000458938 192 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 AC010531.2-201ENST00000465012 153 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 RPL21P129-201ENST00000491732 478 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 RNU6-561P-201ENST00000516222 102 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 RNU6-971P-201ENST00000516920 106 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 AC025647.1-201ENST00000517879 253 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 AP001340.1-201ENST00000624405 217 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 MIR6844-201ENST00000637122 62 ntBASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DEPDC4Q8N2C3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 Y_RNA.218-201ENST00000364218 104 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 MIR23B-201ENST00000384832 97 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 RPL21P126-201ENST00000470049 478 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 RN7SL810P-201ENST00000493031 276 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 AC026402.1-201ENST00000513642 170 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 MIR6891-201ENST00000618788 93 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 CENPCP1-201ENST00000533085 2578 ntBASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
DEPDC4Q8N2C3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 AL356292.1-201ENST00000283110 373 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 Y_RNA.71-201ENST00000362892 104 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 RNU2-55P-201ENST00000411146 174 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 RPS12P18-201ENST00000442381 270 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 AC008155.2-201ENST00000464337 397 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 AC010618.1-201ENST00000469924 477 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 RN7SL604P-201ENST00000492589 296 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 IGLVIV-65-201ENST00000517313 360 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 AC006064.5-201ENST00000541782 248 ntBASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.92□□□□□ -1.78
DEPDC4Q8N2C3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 RNU6-597P-201ENST00000365620 102 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 Y_RNA.521-201ENST00000384560 114 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 Y_RNA.542-201ENST00000384641 111 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 RNU6-768P-201ENST00000384683 107 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 SNORA75.5-201ENST00000391291 81 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 Z98941.1-201ENST00000407764 100 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 SNORA79-201ENST00000408376 140 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 MIR1179-201ENST00000408703 91 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 RN7SKP202-201ENST00000410439 330 ntBASIC3.91□□□□□ -1.78
DEPDC4Q8N2C3 AC016717.1-201ENST00000448918 286 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms