Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 AC009541.1-201ENST00000438279 2662 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 RNA5SP361-201ENST00000362686 118 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 Y_RNA.76-201ENST00000362931 109 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 RNU6-942P-201ENST00000363002 107 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 Y_RNA.180-201ENST00000363867 113 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 AL445305.1-201ENST00000432577 575 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 AC009296.1-201ENST00000443146 155 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 AC010099.1-201ENST00000455434 375 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 snoU13.28-201ENST00000459235 104 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 RNU7-175P-201ENST00000515915 61 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 AC090617.3-201ENST00000573670 475 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 MIR3605-201ENST00000583214 100 ntBASIC3.24□□□□□ -1.89
SYNE4Q8N205 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SYNE4Q8N205 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SYNE4Q8N205 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYNE4Q8N205 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SYNE4Q8N205 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYNE4Q8N205 AC233981.2-201ENST00000611524 1614 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYNE4Q8N205 Y_RNA.29-201ENST00000362570 113 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 SNORD81.1-201ENST00000363064 77 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 RNU6-187P-201ENST00000384139 106 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SYNE4Q8N205 RNA5SP213-201ENST00000391031 106 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 RNU6-482P-201ENST00000391068 107 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 RNU4-53P-201ENST00000410828 140 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 AC243964.1-201ENST00000441814 261 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 RPL26P9-201ENST00000457466 433 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 snoU13.30-201ENST00000458951 104 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 AC103975.1-201ENST00000482506 483 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNE4Q8N205 SNORA31.6-201ENST00000516241 130 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.23□□□□□ -1.89
SYNE4Q8N205 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNE4Q8N205 RPL23AP88-201ENST00000605759 454 ntBASIC3.23□□□□□ -1.89
SYNE4Q8N205 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.23□□□□□ -1.89
SYNE4Q8N205 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
SYNE4Q8N205 AC108206.1-201ENST00000570186 4159 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
SYNE4Q8N205 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE4Q8N205 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE4Q8N205 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE4Q8N205 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE4Q8N205 RNU6-17P-201ENST00000384245 107 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 RNU6-886P-201ENST00000384319 105 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 RNU6-18P-201ENST00000384527 107 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 MIR1298-201ENST00000408783 112 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 RNU6-651P-201ENST00000411040 105 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 RN7SKP192-201ENST00000411291 327 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 NDUFS5P4-201ENST00000412983 318 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 AP000870.1-201ENST00000472927 406 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 RNU6-255P-201ENST00000516957 105 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 IGKV3-31-201ENST00000523109 329 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 HMGN2P15-201ENST00000585707 270 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.22□□□□□ -1.89
SYNE4Q8N205 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 U2.14-201ENST00000615943 113 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 SCARNA4-201ENST00000629045 128 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 SNORA43.4-201ENST00000629559 138 ntBASIC3.22□□□□□ -1.89
SYNE4Q8N205 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.22□□□□□ -1.89
SYNE4Q8N205 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYNE4Q8N205 Y_RNA.200-201ENST00000364018 102 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 RNU6-968P-201ENST00000384076 107 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 SNORA19-201ENST00000384737 128 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 MIR32-201ENST00000384965 70 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 RNA5SP252-201ENST00000391131 119 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 BTF3L4P2-201ENST00000392798 346 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNE4Q8N205 U3.37-201ENST00000408528 213 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 RNU4-30P-201ENST00000410245 143 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.21□□□□□ -1.9
SYNE4Q8N205 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNE4Q8N205 EIF1P2-201ENST00000428233 350 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.21□□□□□ -1.9
SYNE4Q8N205 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SYNE4Q8N205 RPS27P29-201ENST00000463110 252 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 RPS23P5-201ENST00000495419 428 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 RNU4-71P-201ENST00000516258 113 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 AL137100.2-201ENST00000555786 315 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 LINC00933-203ENST00000559812 219 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 MIR6134-201ENST00000617606 109 ntBASIC3.21□□□□□ -1.9
SYNE4Q8N205 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.21□□□□□ -1.9
SYNE4Q8N205 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SYNE4Q8N205 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.21□□□□□ -1.9
SYNE4Q8N205 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNE4Q8N205 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYNE4Q8N205 SNORD32A-201ENST00000364805 84 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 RNU4-9P-201ENST00000364951 139 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 MIR27B-201ENST00000385129 97 ntBASIC3.2□□□□□ -1.9
SYNE4Q8N205 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms