Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 RNU6-1027P-201ENST00000383998 107 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 MT-TW-201ENST00000387382 68 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 RPL21P3-201ENST00000395517 478 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AL079342.1-201ENST00000401460 267 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 SNORD12B-201ENST00000410433 91 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC146507.2-201ENST00000460608 476 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC098869.1-201ENST00000481627 292 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 RPL23AP70-201ENST00000483361 460 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 RNU6-1143P-201ENST00000516125 104 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC245166.1-201ENST00000521012 253 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AP003733.2-201ENST00000529409 171 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 MIR4435-1-201ENST00000582552 80 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC008739.2-201ENST00000597006 317 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 Y_RNA.772-201ENST00000606692 102 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.72□□□□□ -1.97
SFTPA1Q8IWL2 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.97
SFTPA1Q8IWL2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 RNU4-15P-201ENST00000362613 141 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 SNORD115-8-201ENST00000363856 82 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 RNA5SP139-201ENST00000364340 117 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 SNORD115-38-201ENST00000365037 82 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 Y_RNA.376-201ENST00000365638 108 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 RNU6-472P-201ENST00000384299 107 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 Y_RNA.483-201ENST00000384380 101 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 Y_RNA.556-201ENST00000384677 113 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 MIR1302-6-201ENST00000408466 90 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 RPS26P42-201ENST00000413485 326 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 CBX3P6-201ENST00000430257 527 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AC010095.1-201ENST00000443543 144 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 TRBV12-1-201ENST00000479785 344 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AP004217.1-201ENST00000480579 346 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AC145146.1-201ENST00000496370 254 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 SNORA25.14-201ENST00000516481 132 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 RNA5SP54-201ENST00000516951 92 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AC093331.1-201ENST00000521474 169 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 AC107294.3-201ENST00000609211 526 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.71□□□□□ -1.98
SFTPA1Q8IWL2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 OR56A5-201ENST00000340110 738 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 RNA5SP289-201ENST00000362332 137 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 RNU6-137P-201ENST00000363680 108 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 RNU6-280P-201ENST00000364145 104 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 MIR1261-201ENST00000408659 82 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 RNA5SP508-201ENST00000411327 119 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 BMS1P22-201ENST00000414726 313 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 AL451074.5-201ENST00000415894 435 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 RPL31P41-201ENST00000477967 372 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 RN7SKP49-201ENST00000516675 260 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 AC109329.2-201ENST00000519658 482 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 AC136932.1-201ENST00000574771 208 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 PCGEM1.1-201ENST00000613431 131 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 MIR376A1-201ENST00000616574 68 ntBASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SFTPA1Q8IWL2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 RNU6-1083P-201ENST00000384022 107 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 RNU6-937P-201ENST00000384325 106 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 MIR215-201ENST00000384858 110 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 MIR329-1-201ENST00000385028 80 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 MIR887-201ENST00000401258 79 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 EIF4EP4-201ENST00000424916 578 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 RPS29P12-201ENST00000460178 152 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 AC140059.1-201ENST00000489238 361 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 Y_RNA.668-201ENST00000516233 93 ntBASIC2.69□□□□□ -1.98
SFTPA1Q8IWL2 Y_RNA.713-201ENST00000517013 96 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms