Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 AC010095.1-201ENST00000443543 144 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 HMGN2P10-201ENST00000448085 265 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 AC005042.3-201ENST00000453230 174 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 RNU6-966P-201ENST00000516479 104 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 AC021231.3-201ENST00000558497 370 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 AP001485.1-201ENST00000604799 199 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 BX322639.1-202ENST00000423987 2213 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VRK3Q8IV63 ADAM3A-203ENST00000461344 2157 ntBASIC2.97□□□□□ -1.93
VRK3Q8IV63 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VRK3Q8IV63 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.97□□□□□ -1.93
VRK3Q8IV63 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VRK3Q8IV63 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VRK3Q8IV63 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.96□□□□□ -1.94
VRK3Q8IV63 Y_RNA.8-201ENST00000362353 102 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 RNU6-653P-201ENST00000363074 106 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 RNU6-487P-201ENST00000365430 104 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 RNU6-622P-201ENST00000384272 103 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 RNU6-1081P-201ENST00000384537 107 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 Y_RNA.597-201ENST00000410463 100 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 BMS1P22-201ENST00000414726 313 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.96□□□□□ -1.94
VRK3Q8IV63 AC091179.1-201ENST00000461606 579 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 RNU6-191P-201ENST00000516295 94 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 AC009163.5-201ENST00000575421 637 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 MIR3690-201ENST00000580266 75 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 AL078605.1-201ENST00000603529 500 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 AL161756.2-201ENST00000604597 246 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.96□□□□□ -1.94
VRK3Q8IV63 AC104465.1-201ENST00000611365 139 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 AC010999.1-201ENST00000611856 324 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 AL365265.1-201ENST00000621045 234 ntBASIC2.96□□□□□ -1.94
VRK3Q8IV63 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.96□□□□□ -1.94
VRK3Q8IV63 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
VRK3Q8IV63 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VRK3Q8IV63 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VRK3Q8IV63 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
VRK3Q8IV63 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VRK3Q8IV63 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 RNU6-525P-201ENST00000363685 104 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 RNU5F-3P-201ENST00000363767 117 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 RNU6-873P-201ENST00000363833 107 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 Y_RNA.262-201ENST00000364641 102 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 Y_RNA.308-201ENST00000365043 101 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 BPY2DP-201ENST00000422208 265 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 AC012306.1-201ENST00000423267 114 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 AC244670.1-201ENST00000436879 112 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 AC009237.7-201ENST00000447357 229 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 RNA5SP385-201ENST00000515947 110 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 AC245166.1-201ENST00000521012 253 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 NACAP3-201ENST00000552100 481 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 AC005828.6-201ENST00000606610 232 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 snoU18.1-201ENST00000629629 71 ntBASIC2.95□□□□□ -1.94
VRK3Q8IV63 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.95□□□□□ -1.94
VRK3Q8IV63 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
VRK3Q8IV63 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 Y_RNA.101-201ENST00000363154 102 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 RNU6-270P-201ENST00000364131 105 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 RNU6-1280P-201ENST00000365211 107 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 UQCRHP3-201ENST00000451503 251 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 snoU13.6-201ENST00000458785 104 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 RN7SL75P-201ENST00000461926 281 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 RPL30P12-201ENST00000474666 353 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 RPS4XP13-201ENST00000483219 789 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 RNA5SP468-201ENST00000516782 93 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 AC018448.1-201ENST00000552843 316 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 AC021739.1-201ENST00000559631 174 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 AL359198.2-201ENST00000611836 194 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 MIR3529-201ENST00000637713 78 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 ZNF204P-201ENST00000416749 2397 ntBASIC2.94□□□□□ -1.94
VRK3Q8IV63 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
VRK3Q8IV63 MTND5P35-201ENST00000557537 1720 ntBASIC2.93□□□□□ -1.94
VRK3Q8IV63 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VRK3Q8IV63 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.93□□□□□ -1.94
VRK3Q8IV63 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.93□□□□□ -1.94
VRK3Q8IV63 MIR422A-201ENST00000362286 90 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms