Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.11□□□□□ -2.07
LDB1Q86U70 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.11□□□□□ -2.07
LDB1Q86U70 TCL6_2.1-201ENST00000615162 119 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
LDB1Q86U70 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LDB1Q86U70 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LDB1Q86U70 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LDB1Q86U70 Y_RNA.142-201ENST00000363491 102 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 RNU6-438P-201ENST00000365561 103 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 MIR153-2-201ENST00000385225 87 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 RNA5SP425-201ENST00000410336 112 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 WARS2P1-201ENST00000429678 537 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.1□□□□□ -2.07
LDB1Q86U70 MTND4P17-201ENST00000470444 350 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.1□□□□□ -2.07
LDB1Q86U70 ATP5EP1-201ENST00000510257 156 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.1□□□□□ -2.07
LDB1Q86U70 AL590705.4-201ENST00000532209 134 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 CBX3P8-201ENST00000532412 525 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.1□□□□□ -2.07
LDB1Q86U70 SNRPGP18-201ENST00000553000 214 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 RPS3AP23-202ENST00000574601 686 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.1□□□□□ -2.07
LDB1Q86U70 AC009229.3-201ENST00000608056 282 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 MIR6840-201ENST00000611937 71 ntBASIC2.1□□□□□ -2.07
LDB1Q86U70 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
LDB1Q86U70 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LDB1Q86U70 BX322639.1-202ENST00000423987 2213 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LDB1Q86U70 SNORD115-3-201ENST00000363100 82 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 RNU6-137P-201ENST00000363680 108 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 SNORD115-8-201ENST00000363856 82 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 SNORD31B-201ENST00000364977 69 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 SNORD115-38-201ENST00000365037 82 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 Y_RNA.332-201ENST00000365271 113 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 RNU6-1026P-201ENST00000384465 108 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 SNORA64-201ENST00000384674 134 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.09□□□□□ -2.07
LDB1Q86U70 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.09□□□□□ -2.07
LDB1Q86U70 MTND5P20-201ENST00000448677 143 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.09□□□□□ -2.07
LDB1Q86U70 TOMM22P6-201ENST00000465035 409 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 RPL30P10-201ENST00000488148 337 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 AC105029.1-201ENST00000520250 669 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 ANP32BP3-201ENST00000559213 706 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 MIR5006-201ENST00000583027 110 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 AC005899.2-201ENST00000584353 90 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 AC016727.1-205ENST00000605437 569 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 AC025754.2-201ENST00000606491 432 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 AC098657.3-201ENST00000620434 263 ntBASIC2.09□□□□□ -2.07
LDB1Q86U70 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
LDB1Q86U70 KPNA2P1-201ENST00000458289 1591 ntBASIC2.09□□□□□ -2.08
LDB1Q86U70 Y_RNA.48-201ENST00000362710 103 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 RNU6-17P-201ENST00000384245 107 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 RNU6-18P-201ENST00000384527 107 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 MIR518A2-201ENST00000384966 87 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 SNORA48.3-201ENST00000391081 134 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 SNORA75.4-201ENST00000391278 119 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 RNU4-14P-201ENST00000410858 122 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 AC123900.1-201ENST00000420390 96 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 USMG5P1-201ENST00000425964 177 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 AC004386.2-201ENST00000441858 148 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 RPL7P42-201ENST00000481005 679 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 AC091951.2-201ENST00000500762 203 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.08□□□□□ -2.08
LDB1Q86U70 RNU6-307P-201ENST00000516743 106 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 DEFB131C-201ENST00000528817 165 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.08□□□□□ -2.08
LDB1Q86U70 AC104581.2-201ENST00000572227 430 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.08□□□□□ -2.08
LDB1Q86U70 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.08□□□□□ -2.08
LDB1Q86U70 AC078899.2-201ENST00000595282 212 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 AC113139.1-201ENST00000605049 239 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 AL359697.1-201ENST00000624879 587 ntBASIC2.08□□□□□ -2.08
LDB1Q86U70 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.08□□□□□ -2.08
LDB1Q86U70 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
LDB1Q86U70 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LDB1Q86U70 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LDB1Q86U70 ZNF204P-201ENST00000416749 2397 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 Y_RNA.319-201ENST00000365138 92 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RNY3P14-201ENST00000384309 102 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 Y_RNA.474-201ENST00000384341 102 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RNU6-541P-201ENST00000384709 110 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 MIR487A-201ENST00000385009 80 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 SNORA12.2-201ENST00000391040 156 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RN7SKP192-201ENST00000411291 327 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 AL139156.1-201ENST00000412785 841 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.07□□□□□ -2.08
LDB1Q86U70 IPO7P1-201ENST00000442031 636 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 AC009237.7-201ENST00000447357 229 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RN7SL429P-201ENST00000479090 223 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RN7SL489P-201ENST00000486185 223 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RN7SL327P-201ENST00000488659 223 ntBASIC2.07□□□□□ -2.08
LDB1Q86U70 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms