Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.64□□□□□ -2.15
RAI1Q7Z5J4 RNU6-875P-201ENST00000516488 106 ntBASIC1.64□□□□□ -2.15
RAI1Q7Z5J4 MIR5006-201ENST00000583027 110 ntBASIC1.64□□□□□ -2.15
RAI1Q7Z5J4 AL670379.2-201ENST00000604983 252 ntBASIC1.64□□□□□ -2.15
RAI1Q7Z5J4 AL132822.1-201ENST00000617063 513 ntBASIC1.64□□□□□ -2.15
RAI1Q7Z5J4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.64□□□□□ -2.15
RAI1Q7Z5J4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 RNU4-73P-201ENST00000363164 141 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 Y_RNA.166-201ENST00000363730 102 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 RNU6-601P-201ENST00000384540 107 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 RNU11-3P-201ENST00000391111 133 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 AC007098.1-201ENST00000420122 367 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 NCOR1P3-201ENST00000420479 303 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 RPS3AP52-201ENST00000435639 297 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 RNA5SP233-201ENST00000459153 113 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 AL590705.4-201ENST00000532209 134 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 MIR3126-201ENST00000577443 74 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 AC091135.1-201ENST00000585943 307 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 MIR3976-201ENST00000606807 139 ntBASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
RAI1Q7Z5J4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU6-596P-201ENST00000365395 98 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU6-1032P-201ENST00000384100 107 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU6-17P-201ENST00000384245 107 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU6-18P-201ENST00000384527 107 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 MIR29C-201ENST00000385231 88 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 U3.40-201ENST00000408706 208 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 MTND3P23-201ENST00000431980 347 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 PRELID3BP1-201ENST00000457142 540 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 MIR449C-201ENST00000516047 92 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 Y_RNA.718-201ENST00000517110 102 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU2-19P-201ENST00000517288 84 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RMST_6.1-201ENST00000611980 203 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AP000560.1-201ENST00000624150 1937 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU6-212P-201ENST00000362642 104 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU6-280P-201ENST00000364145 104 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 RNU6-867P-201ENST00000364956 107 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 MTCYBP2-201ENST00000407745 171 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 BX510359.4-201ENST00000423750 193 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 CBX3P6-201ENST00000430257 527 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 USP9YP30-201ENST00000430729 455 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 MTCO3P29-201ENST00000432119 779 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AC079354.2-201ENST00000453523 154 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AC096745.1-201ENST00000509945 370 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 AL078605.1-201ENST00000603529 500 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 SNRPGP17-201ENST00000603780 214 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 MIR8070-201ENST00000616510 88 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.62□□□□□ -2.15
RAI1Q7Z5J4 LINC02555-201ENST00000563933 1951 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 RNU6-99P-201ENST00000364721 107 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 MIR1294-201ENST00000408503 142 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 SRIP3-201ENST00000413200 219 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 MTND4LP16-201ENST00000440828 295 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 HMGN2P26-201ENST00000463169 339 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 AC140059.1-201ENST00000489238 361 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 HMGB3P3-201ENST00000510526 400 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 EIF4A1P12-201ENST00000551910 141 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 UBL5P4-201ENST00000562584 236 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 SCARNA4-201ENST00000629045 128 ntBASIC1.61□□□□□ -2.15
RAI1Q7Z5J4 SNORD81.2-201ENST00000365153 76 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 AL033519.2-201ENST00000403958 392 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 RNU2-41P-201ENST00000410991 178 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 MTCYBP10-201ENST00000424905 650 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 RPL30P4-201ENST00000429309 333 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 AC026782.1-201ENST00000512952 449 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 AC074133.1-201ENST00000515696 183 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 RNU6-612P-201ENST00000516909 102 ntBASIC1.6□□□□□ -2.15
RAI1Q7Z5J4 RNU1-54P-201ENST00000517181 120 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms