Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC084357.1-201ENST00000473404 255 ntBASIC4.07□□□□□ -1.76
LYSMD3Q7Z3D4 RPL36AP21-201ENST00000490372 323 ntBASIC4.07□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-412P-201ENST00000516434 106 ntBASIC4.07□□□□□ -1.76
LYSMD3Q7Z3D4 HSPE1P18-201ENST00000517602 280 ntBASIC4.07□□□□□ -1.76
LYSMD3Q7Z3D4 AC091152.3-201ENST00000604227 325 ntBASIC4.07□□□□□ -1.76
LYSMD3Q7Z3D4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LYSMD3Q7Z3D4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
LYSMD3Q7Z3D4 AL133412.1-201ENST00000380194 2992 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 RNU1-89P-201ENST00000384592 164 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-748P-201ENST00000384648 107 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 MIR586-201ENST00000385035 97 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 RPL21P65-201ENST00000406094 466 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 AC018630.3-201ENST00000542637 96 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-91P-201ENST00000607774 107 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 AC093732.2-201ENST00000607950 274 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 AC073308.1-201ENST00000623696 305 ntBASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LYSMD3Q7Z3D4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-50P-201ENST00000362356 103 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 Y_RNA.281-201ENST00000364774 94 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 MIR23B-201ENST00000384832 97 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 MIR607-201ENST00000385241 96 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 SNORD72-201ENST00000390994 80 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AC078817.1-201ENST00000492623 435 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 RNA5SP153-201ENST00000516498 76 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 RNA5SP468-201ENST00000516782 93 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-762P-201ENST00000517107 102 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AC034105.4-201ENST00000568304 277 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 MIR4286-201ENST00000580651 93 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AL022345.2-201ENST00000606307 135 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 MIR6868-201ENST00000611215 58 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 AP001486.2-201ENST00000561652 5113 ntBASIC4.05□□□□□ -1.76
LYSMD3Q7Z3D4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 AL356292.1-201ENST00000283110 373 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 SNORA27.1-201ENST00000362604 124 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 Y_RNA.91-201ENST00000363042 107 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-1107P-201ENST00000364817 104 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 SNORA12-201ENST00000391162 147 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 RNU2-70P-201ENST00000410718 179 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 AC023141.4-201ENST00000412031 328 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 AL117339.2-201ENST00000430475 180 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 RPS26P55-201ENST00000471178 356 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 Vault.1-201ENST00000516474 102 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 IGKV1-22-201ENST00000524313 326 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 AP001318.4-201ENST00000616637 121 ntBASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LYSMD3Q7Z3D4 AC069528.2-201ENST00000624849 1991 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 MIR372-201ENST00000362225 67 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-766P-201ENST00000362478 107 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 Y_RNA.634-201ENST00000364811 113 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 RNU6-1131P-201ENST00000364955 107 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 SNORA51.4-201ENST00000364993 124 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 AL139095.1-201ENST00000404326 391 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 RNA5SP129-201ENST00000410276 118 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 HMGN2P32-201ENST00000444648 269 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 AL162151.2-201ENST00000448875 158 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 AC091153.1-201ENST00000466297 402 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 HMGN2P9-201ENST00000476875 229 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 SNORD19.2-201ENST00000516978 73 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
LYSMD3Q7Z3D4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
LYSMD3Q7Z3D4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.02□□□□□ -1.77
LYSMD3Q7Z3D4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms