Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR23B-201ENST00000384832 97 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC003685.2-201ENST00000422795 395 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC096638.1-201ENST00000444678 216 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 S100A11P2-201ENST00000467589 312 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.32□□□□□ -2.04
SHFQ7M4L6 RNA5SP367-201ENST00000516557 118 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 HSPE1P18-201ENST00000517602 280 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC090517.1-201ENST00000569307 266 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 MIR5695-201ENST00000579717 85 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC006504.6-201ENST00000590142 199 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC125232.2-201ENST00000592457 143 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AL360085.1-201ENST00000604713 532 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AC007179.3-201ENST00000604976 235 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 AL138825.1-201ENST00000618587 192 ntBASIC2.32□□□□□ -2.04
SHFQ7M4L6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
SHFQ7M4L6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.32□□□□□ -2.04
SHFQ7M4L6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHFQ7M4L6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHFQ7M4L6 RNA5SP125-201ENST00000364843 120 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 Y_RNA.422-201ENST00000384054 114 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 RNU6-281P-201ENST00000384212 103 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 RNU6-738P-201ENST00000384531 106 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 RNU6-1160P-201ENST00000384546 104 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 MIR628-201ENST00000385229 95 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SHFQ7M4L6 AC113618.1-201ENST00000416747 285 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.31□□□□□ -2.04
SHFQ7M4L6 RPS12P2-201ENST00000439728 269 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 AL161788.1-201ENST00000441805 169 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 MIR2355-201ENST00000517199 87 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 RN7SKP40-201ENST00000517211 242 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 AC022868.1-201ENST00000517767 391 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.31□□□□□ -2.04
SHFQ7M4L6 AP002770.2-201ENST00000543613 532 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.31□□□□□ -2.04
SHFQ7M4L6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.31□□□□□ -2.04
SHFQ7M4L6 AC005296.1-201ENST00000616145 209 ntBASIC2.31□□□□□ -2.04
SHFQ7M4L6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.31□□□□□ -2.04
SHFQ7M4L6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.31□□□□□ -2.04
SHFQ7M4L6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHFQ7M4L6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHFQ7M4L6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHFQ7M4L6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
SHFQ7M4L6 RNA5SP361-201ENST00000362686 118 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 RNU6-1301P-201ENST00000362724 104 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 RNU1-23P-201ENST00000363361 144 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 Y_RNA.162-201ENST00000363683 102 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 RNU6-318P-201ENST00000384283 103 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 Y_RNA.527-201ENST00000384573 102 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 SNORA44-201ENST00000384584 132 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AC004866.1-201ENST00000411748 78 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AC027124.2-201ENST00000428249 105 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AL135938.1-201ENST00000443141 297 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 MTCO3P8-201ENST00000453691 755 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.3□□□□□ -2.04
SHFQ7M4L6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AC108043.1-201ENST00000512696 574 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 MIR449C-201ENST00000516047 92 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.3□□□□□ -2.04
SHFQ7M4L6 AC018630.3-201ENST00000542637 96 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AC093023.1-201ENST00000547375 507 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AL442163.3-201ENST00000554110 156 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AC008121.3-201ENST00000618726 433 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 AL162373.1-201ENST00000620433 407 ntBASIC2.3□□□□□ -2.04
SHFQ7M4L6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHFQ7M4L6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHFQ7M4L6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.3□□□□□ -2.04
SHFQ7M4L6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.29□□□□□ -2.04
SHFQ7M4L6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
SHFQ7M4L6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SHFQ7M4L6 RNU6-879P-201ENST00000364328 108 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 RNU6-450P-201ENST00000364654 107 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 SNORA18.2-201ENST00000383865 132 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 RNU6-985P-201ENST00000410182 104 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 RNU6-1001P-201ENST00000411265 100 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 AC104389.3-201ENST00000445629 235 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 CYP2C59P-201ENST00000457790 269 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 CKS1BP2-201ENST00000497342 240 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 SNORA25.14-201ENST00000516481 132 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 RNA5SP82-201ENST00000516707 92 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 SNORA48.11-201ENST00000517015 89 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 AC091144.1-201ENST00000519573 138 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 AC040926.1-201ENST00000530195 238 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 CBX3P7-201ENST00000532876 502 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.29□□□□□ -2.04
SHFQ7M4L6 AC026470.2-201ENST00000561492 181 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 MIR92B-201ENST00000607575 96 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 AC005562.2-201ENST00000618264 111 ntBASIC2.29□□□□□ -2.04
SHFQ7M4L6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.29□□□□□ -2.04
SHFQ7M4L6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.29□□□□□ -2.04
SHFQ7M4L6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHFQ7M4L6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SHFQ7M4L6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHFQ7M4L6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SHFQ7M4L6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms