Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC109446.1-201ENST00000566172 220 ntBASIC-0.55□□□□□ -2.5
UBR3Q6ZT12 AC004832.4-201ENST00000608952 331 ntBASIC-0.55□□□□□ -2.5
UBR3Q6ZT12 AC007014.2-201ENST00000615581 479 ntBASIC-0.55□□□□□ -2.5
UBR3Q6ZT12 RNU6-28P-201ENST00000362378 107 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 RNU6-199P-201ENST00000362954 107 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 RNA5SP109-201ENST00000391010 116 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 COX7BP2-201ENST00000437976 242 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 ELOCP30-201ENST00000447108 299 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 SNRPGP1-201ENST00000553864 222 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC092447.9-201ENST00000603395 144 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 BNIP3P9-201ENST00000603714 553 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AL591926.4-201ENST00000616895 298 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC092656.1-203ENST00000624134 423 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 RNA5SP517-201ENST00000364724 117 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AL139421.1-201ENST00000423010 169 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 ART2BP-201ENST00000453501 499 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC114981.1-201ENST00000503897 678 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 SNORA40.12-201ENST00000516329 111 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 RPL23AP91-201ENST00000569211 455 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 MIR4637-201ENST00000582405 84 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 AC104695.3-201ENST00000604052 296 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.56□□□□□ -2.5
UBR3Q6ZT12 MIR1305-201ENST00000408300 86 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 MIR1827-201ENST00000408549 66 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 MTCO2P5-201ENST00000422621 426 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 snoU13.8-201ENST00000458890 104 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 RBBP4P6-201ENST00000508098 202 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 RNU6-567P-201ENST00000516746 107 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 LRRC6P1-201ENST00000532188 885 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 PART1_2.1-201ENST00000612397 250 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 AL513423.1-201ENST00000621695 132 ntBASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.57□□□□□ -2.5
UBR3Q6ZT12 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 SNORD41-201ENST00000386967 70 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AC013262.1-201ENST00000426710 252 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 RNU6-143P-201ENST00000516942 93 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AC105185.1-201ENST00000518705 535 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AL034555.1-201ENST00000604816 211 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AC018889.1-201ENST00000605372 397 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 RNU4-27P-201ENST00000410889 139 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 RPL17P35-201ENST00000432217 549 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AC104629.1-201ENST00000494226 508 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 SNORD111.1-201ENST00000516421 86 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 RNU6-714P-201ENST00000516963 103 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 MTND3P19-201ENST00000603825 345 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 AC112487.2-201ENST00000637950 304 ntBASIC-0.58□□□□□ -2.5
UBR3Q6ZT12 RNU4-76P-201ENST00000364509 141 ntBASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 RNU6-679P-201ENST00000391003 106 ntBASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 SNORA75.6-201ENST00000391318 127 ntBASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 AC074133.1-201ENST00000515696 183 ntBASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 RNU6-917P-201ENST00000516294 104 ntBASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 AP000811.1-201ENST00000603803 651 ntBASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 MIR8054-201ENST00000620877 86 ntBASIC-0.59□□□□□ -2.5
UBR3Q6ZT12 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.6□□□□□ -2.5
UBR3Q6ZT12 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 RNA5SP467-201ENST00000391274 118 ntBASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 MIR892B-201ENST00000401279 77 ntBASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 AL139396.1-201ENST00000421137 167 ntBASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 AC092325.1-201ENST00000566449 554 ntBASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.6□□□□□ -2.51
UBR3Q6ZT12 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 SNORA1.1-201ENST00000364671 133 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 HMGN2P26-201ENST00000463169 339 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 AC109445.1-201ENST00000512356 383 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 MIR3192-201ENST00000584920 77 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 AC015726.2-201ENST00000620112 122 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 SNORD32B-201ENST00000364460 84 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 SNORD113.3-201ENST00000364630 78 ntBASIC-0.61□□□□□ -2.51
UBR3Q6ZT12 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms