Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.54□□□□□ -2.16
ATL3Q6DD88 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.54□□□□□ -2.16
ATL3Q6DD88 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.54□□□□□ -2.16
ATL3Q6DD88 AL645939.4-201ENST00000604495 135 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 RPL17P51-201ENST00000605218 238 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 AC080013.6-201ENST00000606185 215 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 AL357078.3-201ENST00000607528 618 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 AC104458.1-201ENST00000608243 463 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 AL136221.1-201ENST00000621449 509 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.54□□□□□ -2.16
ATL3Q6DD88 AC068137.3-201ENST00000639191 341 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 AC009541.1-201ENST00000438279 2662 ntBASIC1.54□□□□□ -2.16
ATL3Q6DD88 Y_RNA.164-201ENST00000363709 102 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 Y_RNA.231-201ENST00000364358 102 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 RNU6-1317P-201ENST00000364582 104 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 SNORD31B-201ENST00000364977 69 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ATL3Q6DD88 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ATL3Q6DD88 RNU6-1106P-201ENST00000390845 107 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 RPL23AP36-201ENST00000413895 458 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 MTCO3P46-201ENST00000425787 232 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 DLGAP5P1-201ENST00000430307 464 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.53□□□□□ -2.16
ATL3Q6DD88 AC015922.2-201ENST00000435593 184 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 MTATP6P26-201ENST00000445926 662 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 AC104576.1-201ENST00000524225 88 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ATL3Q6DD88 AC016925.2-201ENST00000605108 242 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 AC004492.1-201ENST00000607036 742 ntBASIC1.53□□□□□ -2.16
ATL3Q6DD88 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
ATL3Q6DD88 MTND5P9-201ENST00000503854 1755 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ATL3Q6DD88 RNU6-254P-201ENST00000363377 107 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 RNU4-75P-201ENST00000364621 146 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 Y_RNA.559-201ENST00000384686 107 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 MIR764-201ENST00000390811 85 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 RNU6-174P-201ENST00000410406 106 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 MTCO3P41-201ENST00000414801 328 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 SNRPEP8-201ENST00000442866 260 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 MTND1P1-201ENST00000445453 368 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 AL357134.1-201ENST00000445848 426 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.52□□□□□ -2.17
ATL3Q6DD88 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 AC016925.1-201ENST00000458303 298 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 AC083904.1-201ENST00000487828 231 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 MTCYBP18-201ENST00000501056 747 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.52□□□□□ -2.17
ATL3Q6DD88 SNORA19.2-201ENST00000516013 114 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 DEFB131C-201ENST00000528817 165 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 HMGB1P33-201ENST00000563485 527 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.52□□□□□ -2.17
ATL3Q6DD88 MIR8074-201ENST00000615081 81 ntBASIC1.52□□□□□ -2.17
ATL3Q6DD88 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.51□□□□□ -2.17
ATL3Q6DD88 SNORA32.2-201ENST00000384049 122 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.51□□□□□ -2.17
ATL3Q6DD88 MTND3P9-201ENST00000429526 346 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 ERLEC1P1-201ENST00000433806 578 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 USP9YP28-201ENST00000435142 589 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.51□□□□□ -2.17
ATL3Q6DD88 RNU7-14P-201ENST00000459331 62 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 Y_RNA.704-201ENST00000516851 102 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.51□□□□□ -2.17
ATL3Q6DD88 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.51□□□□□ -2.17
ATL3Q6DD88 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.51□□□□□ -2.17
ATL3Q6DD88 OR4G1P-203ENST00000641984 1631 ntBASIC1.51□□□□□ -2.17
ATL3Q6DD88 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ATL3Q6DD88 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
ATL3Q6DD88 Y_RNA.238-201ENST00000364441 102 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 RNU6-1286P-201ENST00000383871 107 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 RNU6-1093P-201ENST00000391194 107 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 MIR208B-201ENST00000401172 77 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 MIR450B-201ENST00000401182 78 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 RNU6-325P-201ENST00000411132 105 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 RPS26P42-201ENST00000413485 326 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.5□□□□□ -2.17
ATL3Q6DD88 AC139712.2-201ENST00000424302 339 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 SEPT14P3-201ENST00000439401 183 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AL732372.2-207ENST00000445840 183 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.5□□□□□ -2.17
ATL3Q6DD88 SEPT14P2-201ENST00000453405 183 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AC130509.1-201ENST00000464158 433 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AC010409.1-201ENST00000487382 476 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 RPS23P5-201ENST00000495419 428 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.5□□□□□ -2.17
ATL3Q6DD88 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.5□□□□□ -2.17
ATL3Q6DD88 AC025465.3-201ENST00000510570 311 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 SEPT14P4-201ENST00000513445 186 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 RNU6-1281P-201ENST00000516223 105 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 FO082796.1-201ENST00000523795 183 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AP003033.1-201ENST00000527244 415 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.5□□□□□ -2.17
ATL3Q6DD88 MRPS36P4-201ENST00000534436 298 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 FGF7P1-201ENST00000582820 288 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AC010525.2-201ENST00000590920 195 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AL162413.1-201ENST00000603198 110 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AF250324.2-201ENST00000608299 610 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 MIR1321-201ENST00000637766 79 ntBASIC1.5□□□□□ -2.17
ATL3Q6DD88 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms