Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AP000867.2-201ENST00000532468 320 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC010620.2-201ENST00000600135 313 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC110741.2-201ENST00000605278 268 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 uc_338.1-201ENST00000612113 180 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC092593.1-201ENST00000515413 1815 ntBASIC4.05□□□□□ -1.76
USPL1Q5W0Q7 AC135776.4-201ENST00000624300 1904 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 RNU1-35P-201ENST00000362782 153 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 SNORA40.19-201ENST00000390846 128 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 ELOCP21-201ENST00000412558 336 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 AP001324.2-201ENST00000461163 319 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 NDUFB9P3-201ENST00000521269 501 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 RPL21P9-201ENST00000556149 474 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 AC010889.1-201ENST00000566193 2666 ntBASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.04□□□□□ -1.76
USPL1Q5W0Q7 AC017071.1-201ENST00000564407 2204 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 MIR147B-201ENST00000390185 80 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 RNU6-750P-201ENST00000390946 107 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 RNU2-54P-201ENST00000410299 190 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 RNA5SP229-201ENST00000410809 99 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 RNU6-651P-201ENST00000411040 105 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 RPL23AP3-201ENST00000453844 468 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 MIR3910-1-201ENST00000580936 111 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 AC004467.1-201ENST00000615678 330 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 AC006111.3-201ENST00000622137 383 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 MIR3674-201ENST00000636576 68 ntBASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
USPL1Q5W0Q7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 AL157777.2-201ENST00000258070 137 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 MIR449A-201ENST00000362113 91 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 Y_RNA.233-201ENST00000364407 101 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 Y_RNA.240-201ENST00000364469 95 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 RNU6-47P-201ENST00000383866 107 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 RNA5SP201-201ENST00000410316 124 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 Y_RNA.597-201ENST00000410463 100 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 RNU6-1140P-201ENST00000410517 106 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 RNA5SP475-201ENST00000410568 110 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 RPL23AP67-201ENST00000465341 474 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 AC107934.2-201ENST00000518653 310 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 AC055872.1-201ENST00000570978 278 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 AL391813.1-201ENST00000603098 260 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 PCGEM1.1-201ENST00000613431 131 ntBASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
USPL1Q5W0Q7 Y_RNA.262-201ENST00000364641 102 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 RNU6-1264P-201ENST00000383891 107 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 RNU6-918P-201ENST00000391219 106 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 RNA5SP38-201ENST00000410750 119 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 RNA5SP356-201ENST00000515972 94 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 RNU6-191P-201ENST00000516295 94 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 RNU6-344P-201ENST00000516635 111 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 EIF4A1P12-201ENST00000551910 141 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 MIR3133-201ENST00000583157 78 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
USPL1Q5W0Q7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
USPL1Q5W0Q7 Y_RNA.101-201ENST00000363154 102 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 RNU6-774P-201ENST00000363238 107 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 SNORA71.1-201ENST00000364523 117 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 Y_RNA.304-201ENST00000365011 112 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 RNY1P5-201ENST00000383890 115 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4□□□□□ -1.77
USPL1Q5W0Q7 SNORA48.8-201ENST00000391324 134 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 AC024067.1-201ENST00000426199 223 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4□□□□□ -1.77
USPL1Q5W0Q7 AC103975.1-201ENST00000482506 483 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 MIR5692C2-201ENST00000577959 77 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 AC006380.1-201ENST00000603598 186 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 uc_338.25-201ENST00000613756 156 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 TCL6_2.1-201ENST00000615162 119 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 AC091932.3-201ENST00000624223 323 ntBASIC4□□□□□ -1.77
USPL1Q5W0Q7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4□□□□□ -1.77
USPL1Q5W0Q7 AC007496.3-201ENST00000624987 3443 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 AP001486.2-201ENST00000561652 5113 ntBASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.99□□□□□ -1.77
USPL1Q5W0Q7 U3.9-201ENST00000363823 204 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms