Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 AL356575.1-201ENST00000603008 283 ntBASIC3.02□□□□□ -1.93
VPS53Q5VIR6 AC137590.2-201ENST00000619709 240 ntBASIC3.02□□□□□ -1.93
VPS53Q5VIR6 RNU6-1285P-201ENST00000363480 105 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 U3.13-201ENST00000364804 214 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 SNORA29-201ENST00000384183 140 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 RPL19P1-201ENST00000411635 428 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 AC114482.1-201ENST00000418010 247 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 Z82188.1-201ENST00000436709 154 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 RPS12P2-201ENST00000439728 269 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 UBE2DNL-203ENST00000474922 222 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 AF186996.7-201ENST00000492781 209 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 AC109329.1-201ENST00000518744 317 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 AC109329.2-201ENST00000519658 482 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 RPS29P30-201ENST00000600975 111 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 U4.1-201ENST00000620349 87 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 AC135776.4-201ENST00000624300 1904 ntBASIC3.01□□□□□ -1.93
VPS53Q5VIR6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS53Q5VIR6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
VPS53Q5VIR6 Y_RNA.27-201ENST00000362540 103 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 DEFA7P-201ENST00000382676 285 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 RNU6-574P-201ENST00000384265 107 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 SNORA51.11-201ENST00000384442 131 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 Y_RNA.504-201ENST00000384481 104 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 MIR27B-201ENST00000385129 97 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 MIR153-2-201ENST00000385225 87 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 CYCSP48-201ENST00000417124 323 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3□□□□□ -1.93
VPS53Q5VIR6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3□□□□□ -1.93
VPS53Q5VIR6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3□□□□□ -1.93
VPS53Q5VIR6 RPL39P29-201ENST00000447779 157 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 FCF1P4-201ENST00000448326 183 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 RPL36AP48-201ENST00000485521 314 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AC034114.1-201ENST00000520293 285 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AC115990.1-201ENST00000526957 301 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AL442163.3-201ENST00000554110 156 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AL161670.1-201ENST00000554348 137 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AC007375.1-201ENST00000554513 578 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3□□□□□ -1.93
VPS53Q5VIR6 AC090617.3-201ENST00000573670 475 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3□□□□□ -1.93
VPS53Q5VIR6 MIR3671-201ENST00000580455 88 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AL390123.1-201ENST00000603216 237 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AL159153.1-201ENST00000619688 317 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 AC007792.1-201ENST00000623023 402 ntBASIC3□□□□□ -1.93
VPS53Q5VIR6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3□□□□□ -1.93
VPS53Q5VIR6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VPS53Q5VIR6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3□□□□□ -1.93
VPS53Q5VIR6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.99□□□□□ -1.93
VPS53Q5VIR6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VPS53Q5VIR6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS53Q5VIR6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VPS53Q5VIR6 Y_RNA.210-201ENST00000364161 110 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 Y_RNA.358-201ENST00000365491 99 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 RNU1-109P-201ENST00000383960 147 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 Y_RNA.401-201ENST00000383965 117 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 Y_RNA.556-201ENST00000384677 113 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AL590556.1-201ENST00000423231 483 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC244670.1-201ENST00000436879 112 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 GPM6BP3-201ENST00000442797 145 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC104389.3-201ENST00000445629 235 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 TOMM22P6-201ENST00000465035 409 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC087477.1-201ENST00000465747 340 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC107032.1-201ENST00000485945 480 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC132942.1-201ENST00000486753 483 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC021231.3-201ENST00000558497 370 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC069294.1-201ENST00000608397 350 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC096772.1-201ENST00000609146 564 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AC010297.1-201ENST00000623948 149 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 AL450472.1-202ENST00000637286 180 ntBASIC2.99□□□□□ -1.93
VPS53Q5VIR6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
VPS53Q5VIR6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS53Q5VIR6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VPS53Q5VIR6 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VPS53Q5VIR6 Z75746.1-201ENST00000440243 2080 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 MIR6073-201ENST00000352083 89 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 RNU1-76P-201ENST00000362903 159 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 RNA5SP456-201ENST00000364002 114 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 RNY3P4-201ENST00000384428 101 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 MIR218-1-201ENST00000384999 110 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 RPL21P1-201ENST00000399532 476 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 AL139095.1-201ENST00000404326 391 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 U6atac.2-201ENST00000408644 118 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.98□□□□□ -1.93
VPS53Q5VIR6 AL731563.1-201ENST00000442202 214 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 AC080013.2-201ENST00000460866 323 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 RPL30P12-201ENST00000474666 353 ntBASIC2.98□□□□□ -1.93
VPS53Q5VIR6 AP002770.2-201ENST00000543613 532 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms