Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 MTND4P19-201ENST00000446659 478 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 AC003071.1-201ENST00000451219 789 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 AC093899.1-201ENST00000457984 376 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 AC010531.2-201ENST00000465012 153 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 RNU6-1315P-201ENST00000517187 99 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 MIR4666A-201ENST00000580160 79 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 AC131055.1-201ENST00000584626 316 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 AC174048.1-201ENST00000603389 144 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 AL592221.1-201ENST00000605266 382 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 U6.42-201ENST00000618440 107 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 AL603839.4-201ENST00000624658 1005 ntBASIC-0.4□□□□□ -2.47
NUP188Q5SRE5 SNORD113.3-201ENST00000364630 78 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 RNU2-42P-201ENST00000410697 113 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 SNORA40.8-201ENST00000411034 126 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 AL353777.1-201ENST00000425552 326 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 MTND1P31-201ENST00000449206 961 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 SNORA40.12-201ENST00000516329 111 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 AC022868.1-201ENST00000517767 391 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 AC023827.1-201ENST00000569247 97 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 MIR8054-201ENST00000620877 86 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 AL157786.1-207ENST00000627771 695 ntBASIC-0.41□□□□□ -2.47
NUP188Q5SRE5 MIR18A-201ENST00000362310 71 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 RNU6-72P-201ENST00000384285 79 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 RNU6-417P-201ENST00000384712 107 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 MIR145-201ENST00000384967 88 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 RNU6-440P-201ENST00000390882 105 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 RPS26P42-201ENST00000413485 326 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 AL139396.1-201ENST00000421137 167 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 SCARNA8-201ENST00000515924 131 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 AF235103.2-201ENST00000525753 346 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 AL133153.1-201ENST00000557756 303 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 SNORA59B-202ENST00000578183 701 ntBASIC-0.41□□□□□ -2.48
NUP188Q5SRE5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 RNY4P24-201ENST00000362735 96 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 MIR593-201ENST00000384856 100 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 MTND2P6-201ENST00000455337 1030 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 RNU7-136P-201ENST00000458819 69 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 RNU7-140P-201ENST00000459546 60 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 SNORA70.12-201ENST00000516084 153 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 AC025449.1-201ENST00000603896 529 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 AL513423.1-201ENST00000621695 132 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 AC011155.2-201ENST00000623202 216 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 MIR198-201ENST00000637333 62 ntBASIC-0.42□□□□□ -2.48
NUP188Q5SRE5 MIR1-1-201ENST00000362147 71 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 SNORD56.1-201ENST00000362913 68 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC016909.1-201ENST00000415916 166 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AL606517.2-201ENST00000442855 241 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC016925.1-201ENST00000458303 298 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC022447.4-201ENST00000504053 364 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC074133.1-201ENST00000515696 183 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 RNU1-142P-201ENST00000516682 145 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC024995.1-201ENST00000523014 93 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AL390123.1-201ENST00000603216 237 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC138749.5-201ENST00000611461 208 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC090517.2-201ENST00000614966 680 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC120349.2-201ENST00000625002 298 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 AC006927.4-201ENST00000639187 543 ntBASIC-0.43□□□□□ -2.48
NUP188Q5SRE5 RNU6-353P-201ENST00000364266 108 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 SNORD115-48-201ENST00000364764 76 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 SNORD51.1-201ENST00000365405 77 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 SNORA2.2-201ENST00000365473 135 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AL359634.1-202ENST00000404721 284 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 MTCO3P43-201ENST00000440974 771 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 ZNF886P-201ENST00000450781 723 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AC113347.3-201ENST00000509113 148 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AC025465.4-201ENST00000513422 638 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AP001189.2-201ENST00000527320 189 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 MTND3P19-201ENST00000603825 345 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AL034555.1-201ENST00000604816 211 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AL359075.3-201ENST00000613288 217 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AC007014.2-201ENST00000615581 479 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 RNA5SP323-201ENST00000391094 133 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 BTF3P11-201ENST00000426582 477 ntBASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.44□□□□□ -2.48
NUP188Q5SRE5 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms