Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC44A4Q53GD3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 AC073325.2-201ENST00000339545 159 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 OR56A5-201ENST00000340110 738 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.358-201ENST00000365491 99 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.526-201ENST00000384572 110 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 MIR487A-201ENST00000385009 80 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AL512633.1-201ENST00000399931 655 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 RNU6-121P-201ENST00000410525 99 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 RNU2-52P-201ENST00000410680 190 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 RPL21P38-201ENST00000418090 167 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AC097463.2-201ENST00000421074 142 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AIMP1P2-201ENST00000425294 312 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 SNORD109B-201ENST00000458961 67 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 SNORD109A-201ENST00000459128 67 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 RNU7-87P-201ENST00000459343 62 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 TOMM22P6-201ENST00000465035 409 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 RNU6-911P-201ENST00000516523 104 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 SCARNA11.3-201ENST00000517276 130 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 AP003733.2-201ENST00000529409 171 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 AC091544.4-201ENST00000555268 342 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AL356157.2-201ENST00000605122 111 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 RPL23AP88-201ENST00000605759 454 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SLC44A4Q53GD3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3□□□□□ -1.93
SLC44A4Q53GD3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3□□□□□ -1.93
SLC44A4Q53GD3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.14-201ENST00000362415 103 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.60-201ENST00000362831 98 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 RNU1-57P-201ENST00000384491 166 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 MIR218-1-201ENST00000384999 110 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 SNORA12.2-201ENST00000391040 156 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 RPEP5-201ENST00000441137 268 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AP000705.1-201ENST00000454567 350 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AC087477.1-201ENST00000465747 340 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 RN7SL20P-201ENST00000488827 297 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AIG1P1-201ENST00000503376 148 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 RNU6-826P-201ENST00000516827 104 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AC079600.2-201ENST00000550076 130 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 MIR5571-201ENST00000577998 113 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AC010620.2-201ENST00000600135 313 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AL109918.3-201ENST00000603072 338 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AC130454.1-201ENST00000622948 401 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AC099654.7-201ENST00000635788 2127 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 AP003122.5-201ENST00000527668 3766 ntBASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.99□□□□□ -1.93
SLC44A4Q53GD3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 MTND5P6-201ENST00000422338 1798 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 MIR190B-201ENST00000401119 79 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 CYCSP48-201ENST00000417124 323 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 AC078809.1-201ENST00000427601 140 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 U8.22-201ENST00000459141 133 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 AL121594.1-201ENST00000475906 575 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 AC010469.2-201ENST00000496412 480 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 SEM1P1-201ENST00000506694 209 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 AC034114.1-201ENST00000520293 285 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 SCARNA4-201ENST00000629045 128 ntBASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC44A4Q53GD3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 AC092268.1-201ENST00000342691 405 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 RNU6-142P-201ENST00000384019 107 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 RNU6-611P-201ENST00000384276 104 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 MIR215-201ENST00000384858 110 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 MIR32-201ENST00000384965 70 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 SNORA26.3-201ENST00000391119 136 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 EIF4EP4-201ENST00000424916 578 ntBASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.97□□□□□ -1.93
SLC44A4Q53GD3 RN7SKP210-201ENST00000459176 261 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms