Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 SNORA7.4-201ENST00000384249 137 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 RNU6-1026P-201ENST00000384465 108 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 RNU6-121P-201ENST00000410525 99 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 RPL21P38-201ENST00000418090 167 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 S100A11P2-201ENST00000467589 312 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 AC098869.1-201ENST00000481627 292 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 AC008885.1-201ENST00000514930 301 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 AC233702.2-202ENST00000562547 291 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 AC136932.1-201ENST00000574771 208 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 MIR4300-201ENST00000581016 96 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 AL356280.1-201ENST00000603614 379 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.2□□□□□ -1.9
FNDC3BQ53EP0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 Y_RNA.288-201ENST00000364854 92 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 Y_RNA.376-201ENST00000365638 108 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 Y_RNA.396-201ENST00000383949 103 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 RNU6-505P-201ENST00000384427 107 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 RNU6-220P-201ENST00000390919 107 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 SNORD115-46-201ENST00000390982 71 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 Y_RNA.602-201ENST00000410535 92 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 RNU5A-5P-201ENST00000411054 116 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC004866.1-201ENST00000411748 78 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC096920.1-201ENST00000423991 241 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC005002.2-201ENST00000438228 269 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 RNU7-14P-201ENST00000459331 62 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 RPL26P26-201ENST00000480251 434 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC025465.3-201ENST00000510570 311 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 RNU6-965P-201ENST00000516721 96 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC005176.2-201ENST00000596933 147 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AL355297.2-201ENST00000604792 129 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC006386.2-201ENST00000624491 75 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 AC012005.1-201ENST00000624575 75 ntBASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
FNDC3BQ53EP0 SNORD113-8-201ENST00000363497 74 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 SNORD87-201ENST00000364849 89 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 RNU6-546P-201ENST00000383991 107 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 Y_RNA.462-201ENST00000384268 102 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 RNU6-21P-201ENST00000384710 107 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 MIR627-201ENST00000384979 97 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 RNA5SP475-201ENST00000410568 110 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 Z96811.1-201ENST00000445880 108 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 AC117440.1-201ENST00000474107 571 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 TRBVB-201ENST00000477100 408 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 RNU7-110P-201ENST00000516891 62 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 MIR4425-201ENST00000580572 84 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 AC011373.1-201ENST00000607270 237 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 RMST_8.1-201ENST00000610287 165 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 AC068205.3-201ENST00000636385 468 ntBASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
FNDC3BQ53EP0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 RNU6-234P-201ENST00000365229 104 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 RNU2-32P-201ENST00000411193 191 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 AC022018.1-201ENST00000430685 241 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 ARL5AP4-201ENST00000430731 512 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 AP001486.1-201ENST00000463339 476 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 AC006006.1-201ENST00000603082 144 ntBASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.17□□□□□ -1.9
FNDC3BQ53EP0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 AC000403.1-201ENST00000613696 3585 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 Y_RNA.230-201ENST00000364348 109 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.16□□□□□ -1.9
FNDC3BQ53EP0 SNORD63-201ENST00000384262 68 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms