Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNA5SP57-201ENST00000459463 123 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 AC026371.1-201ENST00000551867 419 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 AC146944.4-201ENST00000602697 718 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 AC090617.10-201ENST00000624308 134 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 AC100810.6-201ENST00000638068 285 ntBASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SHROOM1Q2M3G4 AP000560.1-201ENST00000624150 1937 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 AC092268.1-201ENST00000342691 405 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 Y_RNA.89-201ENST00000363031 102 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 Y_RNA.151-201ENST00000363566 112 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 RNY4P14-201ENST00000363656 96 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 RNU11-3P-201ENST00000391111 133 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 RNU2-41P-201ENST00000410991 178 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 AC009310.1-201ENST00000414414 451 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 MTND3P21-201ENST00000433774 331 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 FAM206BP-201ENST00000510179 541 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 AC018630.3-201ENST00000542637 96 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 SUB1P3-201ENST00000564581 315 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 BX248123.2-201ENST00000606318 124 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 MIR8070-201ENST00000616510 88 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 AC139792.2-201ENST00000624218 587 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 AC121333.1-201ENST00000567488 2709 ntBASIC1.82□□□□□ -2.12
SHROOM1Q2M3G4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 RNU4-42P-201ENST00000364738 142 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 Y_RNA.295-201ENST00000364918 102 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-26P-201ENST00000383985 107 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 Y_RNA.453-201ENST00000384223 109 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-1093P-201ENST00000391194 107 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 MTCYBP2-201ENST00000407745 171 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 USP9YP28-201ENST00000435142 589 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 HMGN2P18-201ENST00000450680 270 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 U8.21-201ENST00000459536 136 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 MTCYBP18-201ENST00000501056 747 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 TRMT112P2-201ENST00000512910 132 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 RNA5SP490-201ENST00000517141 136 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 AC087441.2-201ENST00000529141 262 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 SCOCP1-201ENST00000554676 349 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 SNORD53B-201ENST00000577887 78 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 AP000654.2-201ENST00000605633 586 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 AL022345.1-201ENST00000607292 135 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 AL512598.1-201ENST00000610158 273 ntBASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.81□□□□□ -2.12
SHROOM1Q2M3G4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 MIR337-201ENST00000362281 93 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 U3.9-201ENST00000363823 204 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-877P-201ENST00000383868 107 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 RNA5SP201-201ENST00000410316 124 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 AC012306.1-201ENST00000423267 114 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 MTCO3P18-201ENST00000440206 761 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 ATP5EP1-201ENST00000510257 156 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 AC021231.3-201ENST00000558497 370 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 AC090517.1-201ENST00000569307 266 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 AL356157.2-201ENST00000605122 111 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 MIR3662-201ENST00000637030 95 ntBASIC1.8□□□□□ -2.12
SHROOM1Q2M3G4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 CBX3P1-201ENST00000325243 554 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 RNY1P10-201ENST00000363268 113 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 SNORD113-7-201ENST00000363762 77 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-534P-201ENST00000364877 106 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 SNORA32.2-201ENST00000384049 122 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 SNORA29-201ENST00000384183 140 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-933P-201ENST00000384424 107 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 RNU6-790P-201ENST00000384479 105 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 SNORA26.3-201ENST00000391119 136 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 MIR1287-201ENST00000408492 90 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 RPS20P15-201ENST00000412792 311 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 SNRPEP8-201ENST00000442866 260 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 RNU7-66P-201ENST00000459469 62 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 AC007547.1-201ENST00000462177 490 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 AC005741.1-201ENST00000511094 432 ntBASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.79□□□□□ -2.12
SHROOM1Q2M3G4 CYP4A27P-201ENST00000567218 190 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms