Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNU6-89P-201ENST00000606519 100 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AL357078.3-201ENST00000607528 618 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AL355802.3-201ENST00000607571 545 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AL450472.1-202ENST00000637286 180 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 AC099654.12-201ENST00000639868 649 ntBASIC1.08□□□□□ -2.24
TNFRSF9Q07011 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TNFRSF9Q07011 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.38-201ENST00000362617 102 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RNU6-522P-201ENST00000364497 107 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RNU6-142P-201ENST00000384019 107 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.504-201ENST00000384481 104 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 MIR514A2-201ENST00000385131 88 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 MIR514A3-201ENST00000385132 88 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AL590002.1-201ENST00000406554 418 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RNU6-908P-201ENST00000410160 94 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RPL23AP95-201ENST00000426806 265 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 C8orf59P1-201ENST00000429930 303 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 CBX3P6-201ENST00000430257 527 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AL133396.1-201ENST00000432048 687 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RNU6-1208P-201ENST00000459588 107 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.654-201ENST00000497848 106 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC091885.1-201ENST00000506658 268 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC092436.3-201ENST00000511788 257 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 PTP4A1P4-201ENST00000512479 322 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RNU6-1281P-201ENST00000516223 105 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RNU6-506P-201ENST00000516553 94 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC087854.1-201ENST00000519706 414 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 HMGB1P33-201ENST00000563485 527 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 MIR4421-201ENST00000578133 69 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC010525.2-201ENST00000590920 195 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AL022345.1-201ENST00000607292 135 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 RMST_6.1-201ENST00000611980 203 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AC015540.1-201ENST00000615828 501 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 SNORA43.4-201ENST00000629559 138 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TNFRSF9Q07011 AP000560.1-201ENST00000624150 1937 ntBASIC1.07□□□□□ -2.24
TNFRSF9Q07011 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RNU6-1090P-201ENST00000364065 94 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.226-201ENST00000364337 114 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RNU6-1164P-201ENST00000364428 107 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 SNORD32B-201ENST00000364460 84 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.373-201ENST00000365600 103 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RNU6-378P-201ENST00000384324 107 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.554-201ENST00000384672 102 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 MIR597-201ENST00000384968 97 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RN7SKP61-201ENST00000410642 295 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.615-201ENST00000410769 117 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RPL37P10-201ENST00000412884 288 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AL590556.1-201ENST00000423231 483 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 TOMM22P2-201ENST00000430735 237 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RNU6-1037P-201ENST00000459571 107 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RPS29P27-201ENST00000463711 170 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC008628.2-201ENST00000502605 298 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC093259.1-201ENST00000509755 300 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC025465.3-201ENST00000510570 311 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 SNORD60.2-201ENST00000516883 86 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC109446.1-201ENST00000566172 220 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC005668.1-201ENST00000571142 476 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 MIR3136-201ENST00000583498 78 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AL162413.1-201ENST00000603198 110 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AL356157.2-201ENST00000605122 111 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC004492.1-201ENST00000607036 742 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC104458.1-201ENST00000608243 463 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 FAM157A-202ENST00000615155 405 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 OR4G1P-203ENST00000641984 1631 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 AC121333.1-201ENST00000567488 2709 ntBASIC1.06□□□□□ -2.24
TNFRSF9Q07011 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TNFRSF9Q07011 RNU6-623P-201ENST00000363143 105 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 Y_RNA.231-201ENST00000364358 102 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RNU6-1317P-201ENST00000364582 104 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RNU6-392P-201ENST00000364926 101 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RNU6-1329P-201ENST00000365664 107 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RNU6-1106P-201ENST00000390845 107 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 EIF4E2P1-201ENST00000393781 255 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 MIR450B-201ENST00000401182 78 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 MTCYBP2-201ENST00000407745 171 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 RNA5SP201-201ENST00000410316 124 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 MTND3P9-201ENST00000429526 346 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.05□□□□□ -2.24
TNFRSF9Q07011 ERLEC1P1-201ENST00000433806 578 ntBASIC1.05□□□□□ -2.24
TNFRSF9Q07011 SEPT14P3-201ENST00000439401 183 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms