Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
GABPAQ06546 RNU4-13P-201ENST00000364019 141 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 RNU6-968P-201ENST00000384076 107 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 RNA5SP494-201ENST00000410653 129 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AC009161.1-201ENST00000417306 376 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AC096920.1-201ENST00000423991 241 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AL590632.1-201ENST00000424289 371 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 UBE2V1P8-201ENST00000437166 265 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.86□□□□□ -2.11
GABPAQ06546 AL353572.1-201ENST00000442490 417 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 PMCHL2-203ENST00000457791 237 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 RNU7-95P-201ENST00000459222 64 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 RNU7-66P-201ENST00000459469 62 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 RNU6-273P-201ENST00000516937 96 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.86□□□□□ -2.11
GABPAQ06546 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.86□□□□□ -2.11
GABPAQ06546 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.86□□□□□ -2.11
GABPAQ06546 AC090517.1-201ENST00000569307 266 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AC024614.2-201ENST00000577584 372 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AC023043.2-201ENST00000589678 1026 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AP000907.4-201ENST00000604143 237 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GABPAQ06546 AL136221.1-201ENST00000621449 509 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 AC009033.1-201ENST00000624279 431 ntBASIC1.86□□□□□ -2.11
GABPAQ06546 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.85□□□□□ -2.11
GABPAQ06546 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.85□□□□□ -2.11
GABPAQ06546 RNU6-562P-201ENST00000362731 107 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 RNU6-1164P-201ENST00000364428 107 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 Y_RNA.338-201ENST00000365320 114 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 RNU6-438P-201ENST00000365561 103 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 SNORA32.2-201ENST00000384049 122 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 RNU6-95P-201ENST00000384697 107 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
GABPAQ06546 MIR1323-201ENST00000408090 73 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.85□□□□□ -2.11
GABPAQ06546 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.85□□□□□ -2.11
GABPAQ06546 AL513185.2-201ENST00000425543 193 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 PCMTD1P1-201ENST00000455560 355 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 MTND1P11-201ENST00000456661 876 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 RNU7-14P-201ENST00000459331 62 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 AC011352.1-201ENST00000512300 793 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 RNU5F-4P-201ENST00000516581 114 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 AC016256.1-201ENST00000547971 354 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 DNAJC19P9-201ENST00000555084 351 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.85□□□□□ -2.11
GABPAQ06546 FGF7P1-201ENST00000582820 288 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 AL096840.1-201ENST00000603287 93 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 AL022345.1-201ENST00000607292 135 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 AL133215.3-201ENST00000609801 448 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 AL627230.6-201ENST00000611129 280 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.85□□□□□ -2.11
GABPAQ06546 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
GABPAQ06546 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
GABPAQ06546 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
GABPAQ06546 Y_RNA.99-201ENST00000363138 105 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 RNU1-42P-201ENST00000364033 160 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 RNU6-1286P-201ENST00000383871 107 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 RNA5SP118-201ENST00000410385 109 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 FCF1P9-201ENST00000412546 282 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 HMGB1P18-201ENST00000438801 619 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC005741.1-201ENST00000511094 432 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 RNU6-1098P-201ENST00000516772 96 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 RNU6-1314P-201ENST00000517139 104 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.84□□□□□ -2.11
GABPAQ06546 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
GABPAQ06546 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC009994.1-201ENST00000606889 253 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 AC005520.5-201ENST00000613926 164 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 AC093913.1-201ENST00000614178 329 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.11
GABPAQ06546 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 AC098679.4-201ENST00000624241 654 ntBASIC1.84□□□□□ -2.11
GABPAQ06546 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
GABPAQ06546 Y_RNA.212-201ENST00000364177 102 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 SNORD116-11-201ENST00000383882 92 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 MIR597-201ENST00000384968 97 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 RPL23AP36-201ENST00000413895 458 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 SNRPEP8-201ENST00000442866 260 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 AC130509.1-201ENST00000464158 433 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 RPS23P5-201ENST00000495419 428 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 ATP5EP1-201ENST00000510257 156 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 MRPS17P9-201ENST00000511924 393 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.83□□□□□ -2.12
GABPAQ06546 MIR3942-201ENST00000585264 109 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 POLR3GP2-201ENST00000588366 668 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.83□□□□□ -2.12
GABPAQ06546 AC019193.3-201ENST00000609144 554 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
GABPAQ06546 AC233981.2-201ENST00000611524 1614 ntBASIC1.83□□□□□ -2.12
GABPAQ06546 RNU1-58P-201ENST00000362413 163 ntBASIC1.82□□□□□ -2.12
GABPAQ06546 RNU5B-2P-201ENST00000363036 113 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms