Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC027807.2-201ENST00000616099 408 ntBASIC0.39□□□□□ -2.35
CCL20P78556 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.39□□□□□ -2.35
CCL20P78556 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.38□□□□□ -2.35
CCL20P78556 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.38□□□□□ -2.35
CCL20P78556 MIR378A-201ENST00000362177 66 ntBASIC0.38□□□□□ -2.35
CCL20P78556 RNU6-393P-201ENST00000384475 107 ntBASIC0.38□□□□□ -2.35
CCL20P78556 MIR520E-201ENST00000384867 87 ntBASIC0.38□□□□□ -2.35
CCL20P78556 MIR10B-201ENST00000385011 110 ntBASIC0.38□□□□□ -2.35
CCL20P78556 RNU6-440P-201ENST00000390882 105 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AL355796.1-201ENST00000406706 323 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AL034345.1-201ENST00000407768 123 ntBASIC0.38□□□□□ -2.35
CCL20P78556 HMGN1P14-201ENST00000412459 517 ntBASIC0.38□□□□□ -2.35
CCL20P78556 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.38□□□□□ -2.35
CCL20P78556 AL591806.2-201ENST00000433122 173 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AC104850.1-201ENST00000435940 476 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AC074290.1-201ENST00000448883 135 ntBASIC0.38□□□□□ -2.35
CCL20P78556 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL20P78556 USP9YP12-201ENST00000450481 570 ntBASIC0.38□□□□□ -2.35
CCL20P78556 MTATP6P14-201ENST00000455189 673 ntBASIC0.38□□□□□ -2.35
CCL20P78556 RPL39P39-201ENST00000455840 151 ntBASIC0.38□□□□□ -2.35
CCL20P78556 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL20P78556 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.38□□□□□ -2.35
CCL20P78556 RNU6-410P-201ENST00000517006 107 ntBASIC0.38□□□□□ -2.35
CCL20P78556 SNORA25.17-201ENST00000517184 124 ntBASIC0.38□□□□□ -2.35
CCL20P78556 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL20P78556 AC007834.2-201ENST00000536310 343 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AC026470.2-201ENST00000561492 181 ntBASIC0.38□□□□□ -2.35
CCL20P78556 MIR4778-201ENST00000577635 80 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.38□□□□□ -2.35
CCL20P78556 AC098848.2-201ENST00000588023 330 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AC009229.3-201ENST00000608056 282 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AL359075.3-201ENST00000613288 217 ntBASIC0.38□□□□□ -2.35
CCL20P78556 AL133173.2-201ENST00000614270 90 ntBASIC0.38□□□□□ -2.35
CCL20P78556 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CCL20P78556 RNU6-1305P-201ENST00000364353 104 ntBASIC0.37□□□□□ -2.35
CCL20P78556 MIR122-201ENST00000385044 85 ntBASIC0.37□□□□□ -2.35
CCL20P78556 MIR660-201ENST00000385235 97 ntBASIC0.37□□□□□ -2.35
CCL20P78556 SNORA12.1-201ENST00000390873 148 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.37□□□□□ -2.35
CCL20P78556 AL356583.2-201ENST00000426536 280 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AL035398.1-201ENST00000430869 322 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC005002.2-201ENST00000438228 269 ntBASIC0.37□□□□□ -2.35
CCL20P78556 RPEP5-201ENST00000441137 268 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC010095.1-201ENST00000443543 144 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.37□□□□□ -2.35
CCL20P78556 EPS15P1-201ENST00000448836 336 ntBASIC0.37□□□□□ -2.35
CCL20P78556 RNU7-21P-201ENST00000459430 62 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC025465.4-201ENST00000513422 638 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC090572.1-201ENST00000519251 160 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC022878.1-201ENST00000530684 149 ntBASIC0.37□□□□□ -2.35
CCL20P78556 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.37□□□□□ -2.35
CCL20P78556 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.37□□□□□ -2.35
CCL20P78556 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.37□□□□□ -2.35
CCL20P78556 RSL24D1P11-201ENST00000591045 491 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC073349.3-201ENST00000617616 186 ntBASIC0.37□□□□□ -2.35
CCL20P78556 U6.108-201ENST00000637764 58 ntBASIC0.37□□□□□ -2.35
CCL20P78556 AC006927.3-201ENST00000638789 384 ntBASIC0.37□□□□□ -2.35
CCL20P78556 RNU6-199P-201ENST00000362954 107 ntBASIC0.36□□□□□ -2.35
CCL20P78556 RNU5F-7P-201ENST00000363696 115 ntBASIC0.36□□□□□ -2.35
CCL20P78556 RNU6-266P-201ENST00000364225 107 ntBASIC0.36□□□□□ -2.35
CCL20P78556 Y_RNA.327-201ENST00000365201 102 ntBASIC0.36□□□□□ -2.35
CCL20P78556 RNU5E-5P-201ENST00000365379 116 ntBASIC0.36□□□□□ -2.35
CCL20P78556 RNU6-434P-201ENST00000384376 107 ntBASIC0.36□□□□□ -2.35
CCL20P78556 MIR653-201ENST00000385279 96 ntBASIC0.36□□□□□ -2.35
CCL20P78556 MRPL42P3-201ENST00000401492 326 ntBASIC0.36□□□□□ -2.35
CCL20P78556 AL451046.2-201ENST00000403074 277 ntBASIC0.36□□□□□ -2.35
CCL20P78556 AL355143.1-201ENST00000407101 841 ntBASIC0.36□□□□□ -2.35
CCL20P78556 RNU4-46P-201ENST00000410818 138 ntBASIC0.36□□□□□ -2.35
CCL20P78556 AC016909.1-201ENST00000415916 166 ntBASIC0.36□□□□□ -2.35
CCL20P78556 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.36□□□□□ -2.35
CCL20P78556 AL596276.1-201ENST00000434465 418 ntBASIC0.36□□□□□ -2.35
CCL20P78556 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.36□□□□□ -2.35
CCL20P78556 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.36□□□□□ -2.35
CCL20P78556 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.36□□□□□ -2.35
CCL20P78556 RNU2-69P-201ENST00000516061 100 ntBASIC0.36□□□□□ -2.35
CCL20P78556 Vault.3-201ENST00000516676 95 ntBASIC0.36□□□□□ -2.35
CCL20P78556 MTND4P33-201ENST00000556706 766 ntBASIC0.36□□□□□ -2.35
CCL20P78556 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.36□□□□□ -2.35
CCL20P78556 MIR4781-201ENST00000585250 76 ntBASIC0.36□□□□□ -2.35
CCL20P78556 AC091304.9-201ENST00000612091 226 ntBASIC0.36□□□□□ -2.35
CCL20P78556 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
CCL20P78556 RNA5SP499-201ENST00000363982 119 ntBASIC0.35□□□□□ -2.35
CCL20P78556 SNORD70.1-201ENST00000391007 85 ntBASIC0.35□□□□□ -2.35
CCL20P78556 SNORA75.2-201ENST00000391138 150 ntBASIC0.35□□□□□ -2.35
CCL20P78556 SNORA75.3-201ENST00000391231 150 ntBASIC0.35□□□□□ -2.35
CCL20P78556 RPL17P50-201ENST00000396131 546 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AL031577.2-201ENST00000404133 280 ntBASIC0.35□□□□□ -2.35
CCL20P78556 CDK8P2-201ENST00000415020 547 ntBASIC0.35□□□□□ -2.35
CCL20P78556 FABP5P4-201ENST00000437203 171 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AL512286.1-201ENST00000439244 400 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AC009237.7-201ENST00000447357 229 ntBASIC0.35□□□□□ -2.35
CCL20P78556 RNU7-90P-201ENST00000459216 62 ntBASIC0.35□□□□□ -2.35
CCL20P78556 RNU7-57P-201ENST00000459540 60 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AC098869.1-201ENST00000481627 292 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AC079140.5-201ENST00000507882 310 ntBASIC0.35□□□□□ -2.35
CCL20P78556 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.35□□□□□ -2.35
CCL20P78556 AC090049.2-201ENST00000550377 109 ntBASIC0.35□□□□□ -2.35
CCL20P78556 MIR3945-201ENST00000581853 98 ntBASIC0.35□□□□□ -2.35
CCL20P78556 AL357312.1-201ENST00000603879 298 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms