Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC073464.1-201ENST00000429823 534 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.32□□□□□ -2.2
CCNA1P78396 RNU7-167P-201ENST00000459160 62 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 RPS29P1-201ENST00000465274 159 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 RPL31P58-201ENST00000469001 379 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC105417.1-201ENST00000514691 285 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.32□□□□□ -2.2
CCNA1P78396 AL137161.1-201ENST00000532231 390 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC016957.1-201ENST00000534895 309 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AL137100.2-201ENST00000555786 315 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC073648.5-201ENST00000603502 305 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AL391646.1-201ENST00000603860 190 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC087752.4-201ENST00000605911 462 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 RNU6-85P-201ENST00000605989 107 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 U2.17-201ENST00000611454 95 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC022709.1-201ENST00000615967 87 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 Z69908.1-201ENST00000622603 247 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 AC078883.4-201ENST00000623218 367 ntBASIC1.32□□□□□ -2.2
CCNA1P78396 Y_RNA.112-201ENST00000363250 102 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 RNU6-996P-201ENST00000365438 107 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 SNORA36A-201ENST00000384221 132 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 MIR613-201ENST00000385248 95 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CCNA1P78396 RN7SKP61-201ENST00000410642 295 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.31□□□□□ -2.2
CCNA1P78396 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.31□□□□□ -2.2
CCNA1P78396 EIF1P1-201ENST00000421436 341 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.31□□□□□ -2.2
CCNA1P78396 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.31□□□□□ -2.2
CCNA1P78396 AC007395.1-201ENST00000451333 677 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 RPS29P29-201ENST00000456396 171 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 CCDC34P1-201ENST00000507441 517 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 RNU6-567P-201ENST00000516746 107 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 AC069113.1-201ENST00000517763 267 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.31□□□□□ -2.2
CCNA1P78396 AC078795.3-201ENST00000602913 472 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 Z99497.2-201ENST00000603634 310 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 AC083806.3-201ENST00000614016 455 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CCNA1P78396 uc_338.34-201ENST00000617467 174 ntBASIC1.31□□□□□ -2.2
CCNA1P78396 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.31□□□□□ -2.2
CCNA1P78396 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCNA1P78396 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCNA1P78396 AL159152.1-201ENST00000635019 2587 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 SNORD31B-201ENST00000364977 69 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 Y_RNA.399-201ENST00000383955 105 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 SNORD116-8-201ENST00000384365 95 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 Y_RNA.504-201ENST00000384481 104 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 SNORD73A-201ENST00000386062 65 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 RNA5SP201-201ENST00000410316 124 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 ARL5AP1-201ENST00000418991 388 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.3□□□□□ -2.2
CCNA1P78396 MTCO3P29-201ENST00000432119 779 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.3□□□□□ -2.2
CCNA1P78396 AL121601.2-201ENST00000438019 707 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 AC073415.1-201ENST00000449240 153 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.3□□□□□ -2.2
CCNA1P78396 RNU7-180P-201ENST00000459240 63 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 AC108078.1-201ENST00000508073 725 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 RPL39P5-202ENST00000512505 151 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 RNU5F-4P-201ENST00000516581 114 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 RNU6-113P-201ENST00000516653 101 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 RNU6-1223P-201ENST00000517124 104 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.3□□□□□ -2.2
CCNA1P78396 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.3□□□□□ -2.2
CCNA1P78396 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 AC004223.2-201ENST00000590309 544 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 AC008147.4-201ENST00000617570 1204 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 MIR6788-201ENST00000618842 66 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.3□□□□□ -2.2
CCNA1P78396 RNU6-1026P-201ENST00000384465 108 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 RNA5SP219-201ENST00000390940 113 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 MRPL35P1-201ENST00000404272 572 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.29□□□□□ -2.2
CCNA1P78396 AL353193.1-201ENST00000421444 268 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 RPL23AP95-201ENST00000426806 265 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 MTCO2P19-201ENST00000427513 598 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 AC002486.1-201ENST00000435098 391 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.29□□□□□ -2.2
CCNA1P78396 RPS23P4-201ENST00000487908 423 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.29□□□□□ -2.2
CCNA1P78396 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.29□□□□□ -2.2
CCNA1P78396 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCNA1P78396 AC010493.1-201ENST00000513479 292 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.29□□□□□ -2.2
CCNA1P78396 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.29□□□□□ -2.2
CCNA1P78396 AL158211.1-201ENST00000566763 763 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 AC119751.7-201ENST00000600494 245 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 AP001836.1-201ENST00000604675 523 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 MIR6767-201ENST00000637302 66 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 ELL2P3-201ENST00000457883 1602 ntBASIC1.29□□□□□ -2.2
CCNA1P78396 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.28□□□□□ -2.2
CCNA1P78396 Y_RNA.359-201ENST00000365498 102 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 RNU5A-6P-201ENST00000384136 116 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 SNORA26.3-201ENST00000391119 136 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 AL606923.1-201ENST00000406616 190 ntBASIC1.28□□□□□ -2.2
CCNA1P78396 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms