Protein–RNA interactions for Protein: P61158

ACTR3, Actin-related protein 3, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3P61158 snoU13.26-201ENST00000459452 105 ntBASIC1.14□□□□□ -2.23
ACTR3P61158 HMGN1P12-201ENST00000499125 195 ntBASIC1.14□□□□□ -2.23
ACTR3P61158 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.14□□□□□ -2.23
ACTR3P61158 AC025465.4-201ENST00000513422 638 ntBASIC1.14□□□□□ -2.23
ACTR3P61158 RN7SKP88-201ENST00000516847 250 ntBASIC1.14□□□□□ -2.23
ACTR3P61158 7SK.8-201ENST00000612110 250 ntBASIC1.14□□□□□ -2.23
ACTR3P61158 7SK.11-201ENST00000615477 250 ntBASIC1.14□□□□□ -2.23
ACTR3P61158 7SK.13-201ENST00000622040 250 ntBASIC1.14□□□□□ -2.23
ACTR3P61158 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ACTR3P61158 RNU5B-2P-201ENST00000363036 113 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 RNA5SP259-201ENST00000365541 109 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.13□□□□□ -2.23
ACTR3P61158 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ACTR3P61158 RNA5SP219-201ENST00000390940 113 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.13□□□□□ -2.23
ACTR3P61158 MTCYBP8-201ENST00000422855 651 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.13□□□□□ -2.23
ACTR3P61158 AC009237.7-201ENST00000447357 229 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 U8.21-201ENST00000459536 136 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.13□□□□□ -2.23
ACTR3P61158 AC010493.1-201ENST00000513479 292 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 SNORA14.1-201ENST00000516113 141 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 RNU6-430P-201ENST00000517078 107 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 AC024995.1-201ENST00000523014 93 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.13□□□□□ -2.23
ACTR3P61158 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.13□□□□□ -2.23
ACTR3P61158 MIR3664-201ENST00000579074 99 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 AL158827.2-201ENST00000602494 330 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.13□□□□□ -2.23
ACTR3P61158 HULC.1-201ENST00000612720 240 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.13□□□□□ -2.23
ACTR3P61158 AL691447.3-201ENST00000635020 330 ntBASIC1.13□□□□□ -2.23
ACTR3P61158 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ACTR3P61158 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ACTR3P61158 Y_RNA.159-201ENST00000363674 87 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 RNU6-996P-201ENST00000365438 107 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 RNU6-950P-201ENST00000384651 107 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.12□□□□□ -2.23
ACTR3P61158 AL445567.1-201ENST00000439121 144 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 RPS29P27-201ENST00000463711 170 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 MTCO2P4-201ENST00000517968 247 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.12□□□□□ -2.23
ACTR3P61158 AC004223.2-201ENST00000590309 544 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 Z99497.2-201ENST00000603634 310 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 AP000907.4-201ENST00000604143 237 ntBASIC1.12□□□□□ -2.23
ACTR3P61158 SNORA33-201ENST00000363664 130 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 RNU6-1286P-201ENST00000383871 107 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 MIR549A-201ENST00000385268 96 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 MIR1253-201ENST00000408273 105 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 CDK8P2-201ENST00000415020 547 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 MTND3P9-201ENST00000429526 346 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 AC073415.1-201ENST00000449240 153 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.11□□□□□ -2.23
ACTR3P61158 RNA5SP404-201ENST00000517118 132 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.11□□□□□ -2.23
ACTR3P61158 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.11□□□□□ -2.23
ACTR3P61158 AC040904.1-201ENST00000590850 223 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.11□□□□□ -2.23
ACTR3P61158 AC009509.4-201ENST00000619202 509 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 AC006001.4-201ENST00000622243 395 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 AL391262.2-201ENST00000622466 494 ntBASIC1.11□□□□□ -2.23
ACTR3P61158 MTND4P5-201ENST00000435821 1374 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 RNU5A-6P-201ENST00000384136 116 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 RNU6-417P-201ENST00000384712 107 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 MIR586-201ENST00000385035 97 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 AL606923.1-201ENST00000406616 190 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 MIR1289-2-201ENST00000408360 111 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.1□□□□□ -2.23
ACTR3P61158 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.1□□□□□ -2.23
ACTR3P61158 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.1□□□□□ -2.23
ACTR3P61158 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.1□□□□□ -2.23
ACTR3P61158 MTCO2P18-201ENST00000457151 658 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 RN7SL429P-201ENST00000479090 223 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 RN7SL489P-201ENST00000486185 223 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 RN7SL327P-201ENST00000488659 223 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 CCDC34P1-201ENST00000507441 517 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 SNRPGP20-201ENST00000604477 205 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.1□□□□□ -2.23
ACTR3P61158 RN7SL853P-201ENST00000617250 223 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
ACTR3P61158 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
ACTR3P61158 RNU1-22P-201ENST00000363334 158 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 RNU6-1305P-201ENST00000364353 104 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
ACTR3P61158 RNA5SP323-201ENST00000391094 133 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 RPL21P1-201ENST00000399532 476 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 AL121890.1-201ENST00000435457 205 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.09□□□□□ -2.23
ACTR3P61158 MTCO3P8-201ENST00000453691 755 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
ACTR3P61158 AC087854.1-201ENST00000519706 414 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 MIR4742-201ENST00000581069 85 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 AL512598.1-201ENST00000610158 273 ntBASIC1.09□□□□□ -2.23
ACTR3P61158 RNU6-968P-201ENST00000384076 107 ntBASIC1.08□□□□□ -2.24
ACTR3P61158 SNORA25-201ENST00000384384 134 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms