Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RNY3P13-201ENST00000365542 102 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 RNU6-378P-201ENST00000384324 107 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 RNA5SP467-201ENST00000391274 118 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.23□□□□□ -2.45
CKS1BP61024 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.23□□□□□ -2.45
CKS1BP61024 AC069113.3-201ENST00000521019 150 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 LRRC6P1-201ENST00000532188 885 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.23□□□□□ -2.45
CKS1BP61024 MIR4753-201ENST00000585119 83 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 AC009994.1-201ENST00000606889 253 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 AP000484.1-201ENST00000620067 1252 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.23□□□□□ -2.45
CKS1BP61024 AC008133.2-201ENST00000624540 351 ntBASIC-0.23□□□□□ -2.45
CKS1BP61024 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
CKS1BP61024 Y_RNA.116-201ENST00000363292 103 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 RNY4P16-201ENST00000364768 94 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 MRPL42P3-201ENST00000401492 326 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 MIR1287-201ENST00000408492 90 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 AC245047.3-201ENST00000429428 127 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 AC093019.1-201ENST00000443135 252 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.24□□□□□ -2.45
CKS1BP61024 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.24□□□□□ -2.45
CKS1BP61024 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.24□□□□□ -2.45
CKS1BP61024 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-0.24□□□□□ -2.45
CKS1BP61024 RNU1-142P-201ENST00000516682 145 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 OR8K2P-201ENST00000524645 927 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.24□□□□□ -2.45
CKS1BP61024 MIR5190-201ENST00000581537 80 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 AC234772.3-201ENST00000602277 528 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 AL359697.1-201ENST00000624879 587 ntBASIC-0.24□□□□□ -2.45
CKS1BP61024 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CKS1BP61024 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CKS1BP61024 RNA5SP264-201ENST00000363115 107 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 MIR518E-201ENST00000385252 88 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 RNA5SP63-201ENST00000391225 112 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.25□□□□□ -2.45
CKS1BP61024 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.25□□□□□ -2.45
CKS1BP61024 STAG3L5P-204ENST00000443759 179 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 AL360271.2-201ENST00000447710 161 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 snoU13.25-201ENST00000458945 104 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 SNRPGP7-201ENST00000469016 106 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 AC093534.1-201ENST00000504977 132 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.25□□□□□ -2.45
CKS1BP61024 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 AL391840.1-201ENST00000571144 367 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.25□□□□□ -2.45
CKS1BP61024 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.25□□□□□ -2.45
CKS1BP61024 AC005520.5-201ENST00000613926 164 ntBASIC-0.25□□□□□ -2.45
CKS1BP61024 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.25□□□□□ -2.45
CKS1BP61024 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CKS1BP61024 RNU6-562P-201ENST00000362731 107 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 SNORA32.1-201ENST00000364514 115 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 RNU6-621P-201ENST00000364752 109 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 RNU6-609P-201ENST00000365459 107 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CKS1BP61024 AL031779.1-201ENST00000415663 330 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 AC073261.1-201ENST00000429409 121 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.26□□□□□ -2.45
CKS1BP61024 RNU2-10P-201ENST00000516375 211 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 SNORD111.1-201ENST00000516421 86 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 RNU6-567P-201ENST00000516746 107 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 AC092634.7-201ENST00000621022 103 ntBASIC-0.26□□□□□ -2.45
CKS1BP61024 RNA5SP214-201ENST00000363378 118 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 MIR193B-201ENST00000384907 83 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 MIR1253-201ENST00000408273 105 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 MIR1827-201ENST00000408549 66 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AL354692.1-201ENST00000423044 315 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AC092989.1-201ENST00000481235 277 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AC025465.4-201ENST00000513422 638 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AC004584.2-201ENST00000570407 410 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 MIR5697-201ENST00000578045 78 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 MIR3678-201ENST00000578455 94 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 RN7SL793P-201ENST00000583259 296 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AC078795.3-201ENST00000602913 472 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AC144521.1-201ENST00000607148 956 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AC104458.1-201ENST00000608243 463 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 AL359075.3-201ENST00000613288 217 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
CKS1BP61024 AC007014.2-201ENST00000615581 479 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 U6.108-201ENST00000637764 58 ntBASIC-0.27□□□□□ -2.45
CKS1BP61024 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
CKS1BP61024 RNU6-462P-201ENST00000362659 105 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 RNU6-975P-201ENST00000384296 105 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 RNY1P4-201ENST00000384595 115 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 MIR518A1-201ENST00000385068 85 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 AC019070.1-201ENST00000415008 1024 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
CKS1BP61024 AC078938.1-201ENST00000620993 318 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 AC091925.1-201ENST00000623204 462 ntBASIC-0.28□□□□□ -2.45
CKS1BP61024 AP000568.1-201ENST00000282964 442 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 U3.4-201ENST00000363352 213 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 RNU6-700P-201ENST00000391043 107 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 RNU6-994P-201ENST00000410507 111 ntBASIC-0.29□□□□□ -2.46
CKS1BP61024 RNU6-293P-201ENST00000411259 106 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms