Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ACTBP60709 MIR96-201ENST00000362288 78 ntBASIC0.71□□□□□ -2.3
ACTBP60709 RNU6-1097P-201ENST00000363586 107 ntBASIC0.71□□□□□ -2.3
ACTBP60709 RNU4-28P-201ENST00000364739 141 ntBASIC0.71□□□□□ -2.3
ACTBP60709 Y_RNA.508-201ENST00000384502 114 ntBASIC0.71□□□□□ -2.3
ACTBP60709 RNU6-1235P-201ENST00000384559 107 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.71□□□□□ -2.3
ACTBP60709 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.71□□□□□ -2.3
ACTBP60709 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.71□□□□□ -2.3
ACTBP60709 AC009961.2-201ENST00000435771 251 ntBASIC0.71□□□□□ -2.3
ACTBP60709 HMGN2P34-201ENST00000437647 269 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.71□□□□□ -2.3
ACTBP60709 AL031274.1-201ENST00000450334 232 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.71□□□□□ -2.3
ACTBP60709 RNU6-498P-201ENST00000459468 107 ntBASIC0.71□□□□□ -2.3
ACTBP60709 GMFBP1-201ENST00000467831 427 ntBASIC0.71□□□□□ -2.3
ACTBP60709 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ACTBP60709 PSMC1P5-201ENST00000512850 177 ntBASIC0.71□□□□□ -2.3
ACTBP60709 ACA64.5-201ENST00000516207 127 ntBASIC0.71□□□□□ -2.3
ACTBP60709 SNORA70.22-201ENST00000517160 124 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AC136628.3-201ENST00000521868 290 ntBASIC0.71□□□□□ -2.3
ACTBP60709 CBX3P8-201ENST00000532412 525 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AC011604.1-201ENST00000545978 196 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AC016256.1-201ENST00000547971 354 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AGGF1P4-201ENST00000568249 801 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.71□□□□□ -2.3
ACTBP60709 MIR4703-201ENST00000577728 79 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.71□□□□□ -2.3
ACTBP60709 FAM106DP-201ENST00000586416 501 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AP001596.2-201ENST00000608410 312 ntBASIC0.71□□□□□ -2.3
ACTBP60709 MIR6857-201ENST00000613267 93 ntBASIC0.71□□□□□ -2.3
ACTBP60709 SEPT14P19-203ENST00000633205 211 ntBASIC0.71□□□□□ -2.3
ACTBP60709 AC068647.2-201ENST00000637380 353 ntBASIC0.71□□□□□ -2.3
ACTBP60709 MTND4P4-201ENST00000439033 1366 ntBASIC0.7□□□□□ -2.3
ACTBP60709 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
ACTBP60709 RNU6-266P-201ENST00000364225 107 ntBASIC0.7□□□□□ -2.3
ACTBP60709 SNORD114-24-201ENST00000365029 72 ntBASIC0.7□□□□□ -2.3
ACTBP60709 RPS3AP3-201ENST00000411933 242 ntBASIC0.7□□□□□ -2.3
ACTBP60709 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.7□□□□□ -2.3
ACTBP60709 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.7□□□□□ -2.3
ACTBP60709 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.7□□□□□ -2.3
ACTBP60709 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.7□□□□□ -2.3
ACTBP60709 SNORD11.1-201ENST00000459482 85 ntBASIC0.7□□□□□ -2.3
ACTBP60709 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
ACTBP60709 AC010486.2-201ENST00000505572 483 ntBASIC0.7□□□□□ -2.3
ACTBP60709 RN7SKP265-201ENST00000516448 223 ntBASIC0.7□□□□□ -2.3
ACTBP60709 TPRKBP2-201ENST00000565969 475 ntBASIC0.7□□□□□ -2.3
ACTBP60709 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.7□□□□□ -2.3
ACTBP60709 FAM71BP1-201ENST00000604431 523 ntBASIC0.7□□□□□ -2.3
ACTBP60709 AC021506.2-201ENST00000612354 169 ntBASIC0.7□□□□□ -2.3
ACTBP60709 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ACTBP60709 RNU6-1214P-201ENST00000363650 109 ntBASIC0.69□□□□□ -2.3
ACTBP60709 RNU5F-7P-201ENST00000363696 115 ntBASIC0.69□□□□□ -2.3
ACTBP60709 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
ACTBP60709 RNA5SP259-201ENST00000365541 109 ntBASIC0.69□□□□□ -2.3
ACTBP60709 Y_RNA.399-201ENST00000383955 105 ntBASIC0.69□□□□□ -2.3
ACTBP60709 RNU6-42P-201ENST00000384165 107 ntBASIC0.69□□□□□ -2.3
ACTBP60709 SNORD70.1-201ENST00000391007 85 ntBASIC0.69□□□□□ -2.3
ACTBP60709 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.69□□□□□ -2.3
ACTBP60709 Z99497.1-201ENST00000421282 135 ntBASIC0.69□□□□□ -2.3
ACTBP60709 MTCO2P34-201ENST00000421994 607 ntBASIC0.69□□□□□ -2.3
ACTBP60709 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
ACTBP60709 RAB28P5-201ENST00000427490 651 ntBASIC0.69□□□□□ -2.3
ACTBP60709 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.69□□□□□ -2.3
ACTBP60709 RNU7-34P-201ENST00000459394 64 ntBASIC0.69□□□□□ -2.3
ACTBP60709 snoU13.18-201ENST00000459483 104 ntBASIC0.69□□□□□ -2.3
ACTBP60709 HMGN1P12-201ENST00000499125 195 ntBASIC0.69□□□□□ -2.3
ACTBP60709 AC103851.1-201ENST00000506833 274 ntBASIC0.69□□□□□ -2.3
ACTBP60709 AC024995.1-201ENST00000523014 93 ntBASIC0.69□□□□□ -2.3
ACTBP60709 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.69□□□□□ -2.3
ACTBP60709 RSL24D1P11-201ENST00000591045 491 ntBASIC0.69□□□□□ -2.3
ACTBP60709 AL603839.4-201ENST00000624658 1005 ntBASIC0.69□□□□□ -2.3
ACTBP60709 AC008163.1-202ENST00000636004 2889 ntBASIC0.69□□□□□ -2.3
ACTBP60709 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
ACTBP60709 RNU6-975P-201ENST00000384296 105 ntBASIC0.68□□□□□ -2.3
ACTBP60709 RNY1P14-201ENST00000384426 108 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR520E-201ENST00000384867 87 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR1-2-201ENST00000384961 85 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR100-201ENST00000385259 80 ntBASIC0.68□□□□□ -2.3
ACTBP60709 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
ACTBP60709 AL593851.1-201ENST00000426171 157 ntBASIC0.68□□□□□ -2.3
ACTBP60709 RPS29P15-201ENST00000458329 171 ntBASIC0.68□□□□□ -2.3
ACTBP60709 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.68□□□□□ -2.3
ACTBP60709 AC005178.1-201ENST00000508392 440 ntBASIC0.68□□□□□ -2.3
ACTBP60709 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.68□□□□□ -2.3
ACTBP60709 RNU6-948P-201ENST00000516374 107 ntBASIC0.68□□□□□ -2.3
ACTBP60709 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.68□□□□□ -2.3
ACTBP60709 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.68□□□□□ -2.3
ACTBP60709 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR3682-201ENST00000581338 84 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR3941-201ENST00000582572 103 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR151B-201ENST00000584249 96 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR4753-201ENST00000585119 83 ntBASIC0.68□□□□□ -2.3
ACTBP60709 AC104458.1-201ENST00000608243 463 ntBASIC0.68□□□□□ -2.3
ACTBP60709 AC006566.1-201ENST00000608943 513 ntBASIC0.68□□□□□ -2.3
ACTBP60709 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.68□□□□□ -2.3
ACTBP60709 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.68□□□□□ -2.3
ACTBP60709 AL359697.1-201ENST00000624879 587 ntBASIC0.68□□□□□ -2.3
ACTBP60709 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
ACTBP60709 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms