Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.28□□□□□ -2.36
AP3S2P59780 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.28□□□□□ -2.36
AP3S2P59780 AC012306.1-201ENST00000423267 114 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 MTCO2P12-201ENST00000427426 682 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AC245047.3-201ENST00000429428 127 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.28□□□□□ -2.36
AP3S2P59780 AC013470.1-201ENST00000453438 462 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 USP9YP25-201ENST00000457708 443 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AL049830.1-201ENST00000468034 425 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.28□□□□□ -2.36
AP3S2P59780 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AK3P2-201ENST00000507976 429 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.28□□□□□ -2.36
AP3S2P59780 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.28□□□□□ -2.36
AP3S2P59780 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 RNU6-1220P-201ENST00000517126 108 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.28□□□□□ -2.36
AP3S2P59780 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.28□□□□□ -2.36
AP3S2P59780 MIR4498-201ENST00000577599 66 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AC025627.3-201ENST00000582078 182 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AC146944.4-201ENST00000602697 718 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AC064807.4-201ENST00000607201 407 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AL139418.1-201ENST00000613613 177 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AL607023.1-201ENST00000620045 248 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AL359697.1-201ENST00000624879 587 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 AL138960.2-201ENST00000625145 535 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 MIR5087-201ENST00000635826 76 ntBASIC0.28□□□□□ -2.36
AP3S2P59780 RNA5SP347-201ENST00000362445 119 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 RNY1P10-201ENST00000363268 113 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
AP3S2P59780 MIR653-201ENST00000385279 96 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 RNU6-440P-201ENST00000390882 105 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AP000275.1-201ENST00000411943 390 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AL117339.3-201ENST00000418733 162 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 RPS27AP14-201ENST00000422868 454 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.27□□□□□ -2.37
AP3S2P59780 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.27□□□□□ -2.37
AP3S2P59780 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.27□□□□□ -2.37
AP3S2P59780 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.27□□□□□ -2.37
AP3S2P59780 MTATP6P16-201ENST00000434543 526 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 MTCO2P29-201ENST00000465212 189 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AC112204.1-201ENST00000502591 103 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AC008628.2-201ENST00000502605 298 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.27□□□□□ -2.37
AP3S2P59780 SNORA70.12-201ENST00000516084 153 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 RN7SKP12-201ENST00000516275 143 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 RNU6-1178P-201ENST00000516674 107 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.27□□□□□ -2.37
AP3S2P59780 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.27□□□□□ -2.37
AP3S2P59780 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AL136221.1-201ENST00000621449 509 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 U6.108-201ENST00000637764 58 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 AC013437.2-201ENST00000639587 677 ntBASIC0.27□□□□□ -2.37
AP3S2P59780 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.27□□□□□ -2.37
AP3S2P59780 RNU4-68P-201ENST00000364314 141 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 RNU6-715P-201ENST00000365204 103 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 RNU6-827P-201ENST00000365553 106 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 RNU6-163P-201ENST00000384396 106 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 MIR660-201ENST00000385235 97 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AL451046.2-201ENST00000403074 277 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 RNU6-57P-201ENST00000411348 103 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AC092628.1-201ENST00000436250 252 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AC079382.1-201ENST00000493346 557 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 RNU1-142P-201ENST00000516682 145 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AC105185.1-201ENST00000518705 535 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AP003168.1-201ENST00000530091 307 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AC090049.2-201ENST00000550377 109 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.26□□□□□ -2.37
AP3S2P59780 MIR4714-201ENST00000580728 77 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 MIR5006-201ENST00000583027 110 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AL031775.1-201ENST00000607014 887 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 7SK.10-201ENST00000621414 298 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AL078595.3-201ENST00000623815 1166 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 AL359757.2-201ENST00000624309 274 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 MTND4P5-201ENST00000435821 1374 ntBASIC0.26□□□□□ -2.37
AP3S2P59780 RNU6-199P-201ENST00000362954 107 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 RNU6-931P-201ENST00000363850 107 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 SNORD115-7-201ENST00000365306 82 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 RNU4-48P-201ENST00000365559 182 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.25□□□□□ -2.37
AP3S2P59780 SNORD89-201ENST00000390981 114 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 CDK8P2-201ENST00000415020 547 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 AC016909.1-201ENST00000415916 166 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 AC022364.2-201ENST00000457963 554 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 RPS29P1-201ENST00000465274 159 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 LRRC34P2-201ENST00000514850 553 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.25□□□□□ -2.37
AP3S2P59780 RNU6-917P-201ENST00000516294 104 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.25□□□□□ -2.37
AP3S2P59780 AC104010.1-201ENST00000616889 150 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 AC073349.3-201ENST00000617616 186 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 AC005562.2-201ENST00000618264 111 ntBASIC0.25□□□□□ -2.37
AP3S2P59780 RNA5SP499-201ENST00000363982 119 ntBASIC0.24□□□□□ -2.37
AP3S2P59780 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
AP3S2P59780 RNU6-550P-201ENST00000391057 101 ntBASIC0.24□□□□□ -2.37
AP3S2P59780 RNU6-1000P-201ENST00000391066 106 ntBASIC0.24□□□□□ -2.37
AP3S2P59780 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
AP3S2P59780 MRPL42P2-201ENST00000403169 426 ntBASIC0.24□□□□□ -2.37
AP3S2P59780 AL034345.1-201ENST00000407768 123 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms