Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 XGY1-201ENST00000381172 446 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 Y_RNA.394-201ENST00000383942 103 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 RNU6-546P-201ENST00000383991 107 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 Y_RNA.428-201ENST00000384078 102 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CLDN20P56880 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN20P56880 RNU2-32P-201ENST00000411193 191 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 MRPS18CP6-201ENST00000423587 223 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN20P56880 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN20P56880 RNU7-26P-201ENST00000458980 63 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.22□□□□□ -2.05
CLDN20P56880 AC132942.1-201ENST00000486753 483 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN20P56880 Y_RNA.701-201ENST00000516812 110 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 RNU7-4P-201ENST00000516961 62 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 SNORD116.3-201ENST00000517176 78 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN20P56880 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN20P56880 AC016727.2-201ENST00000603988 621 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 MIR1244-1-201ENST00000612829 85 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 MIR1244-3-201ENST00000635744 85 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 MIR1244-2-201ENST00000636449 85 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 MIR1244-4-202ENST00000636813 85 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CLDN20P56880 BX322639.1-202ENST00000423987 2213 ntBASIC2.22□□□□□ -2.05
CLDN20P56880 Y_RNA.5-201ENST00000362334 102 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 Y_RNA.106-201ENST00000363189 100 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 RNA5SP456-201ENST00000364002 114 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 Y_RNA.364-201ENST00000365532 101 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 RNU6-26P-201ENST00000383985 107 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 RNU6-1072P-201ENST00000384703 107 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 RNU6-443P-201ENST00000384780 107 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 MIR487A-201ENST00000385009 80 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 MIR320B2-201ENST00000408479 138 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN20P56880 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN20P56880 AC018865.2-201ENST00000423631 129 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 MTCO2P12-201ENST00000427426 682 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 USP9YP16-201ENST00000430287 407 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AL137792.2-201ENST00000443484 235 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AL035666.1-201ENST00000446195 348 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 USP9YP23-201ENST00000455085 407 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN20P56880 ANXA2P1-201ENST00000505539 926 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AC105758.1-201ENST00000506038 399 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN20P56880 RNA5SP82-201ENST00000516707 92 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN20P56880 AC022616.8-201ENST00000533569 253 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 SNRPGP18-201ENST00000553000 214 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN20P56880 MIR4513-201ENST00000581077 86 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 SNRPGP20-201ENST00000604477 205 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 uc_338.22-201ENST00000622722 187 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AC091925.1-201ENST00000623204 462 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 AC022140.2-201ENST00000623500 188 ntBASIC2.21□□□□□ -2.06
CLDN20P56880 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CLDN20P56880 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN20P56880 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CLDN20P56880 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN20P56880 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN20P56880 Y_RNA.128-201ENST00000363391 112 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 RNU6-694P-201ENST00000364071 147 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 SNORA67.4-201ENST00000384688 142 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 RNU1-139P-201ENST00000391307 165 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 AL359511.1-201ENST00000402970 211 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.2□□□□□ -2.06
CLDN20P56880 MTND1P14-201ENST00000427400 950 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 RNU7-87P-201ENST00000459343 62 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 AP000870.1-201ENST00000472927 406 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 AC144568.1-201ENST00000520139 137 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN20P56880 AC044792.1-201ENST00000593294 196 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 AC005562.2-201ENST00000618264 111 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 CTSLP2-204ENST00000629029 392 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 AC134503.1-201ENST00000633048 54 ntBASIC2.2□□□□□ -2.06
CLDN20P56880 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN20P56880 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CLDN20P56880 RNA5SP289-201ENST00000362332 137 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 RNU5F-3P-201ENST00000363767 117 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 Y_RNA.314-201ENST00000365114 102 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 RNU6-245P-201ENST00000384020 107 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 Y_RNA.445-201ENST00000384168 102 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 SNORA69.1-201ENST00000390904 137 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 RNU6-159P-201ENST00000391080 106 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN20P56880 AL354751.2-201ENST00000415471 210 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN20P56880 Y_RNA.631-201ENST00000459607 101 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 Y_RNA.661-201ENST00000516003 99 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 RNU6-1114P-201ENST00000516022 107 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN20P56880 MYL12BP1-201ENST00000569826 507 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 AC090617.3-201ENST00000573670 475 ntBASIC2.19□□□□□ -2.06
CLDN20P56880 TCL6_2.1-201ENST00000615162 119 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms