Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RPL30P10-201ENST00000488148 337 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 RNU6-567P-201ENST00000516746 107 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC4P56524 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC4P56524 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 AC090517.3-201ENST00000625170 141 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
HDAC4P56524 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC4P56524 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HDAC4P56524 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.5□□□□□ -2.01
HDAC4P56524 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HDAC4P56524 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.5□□□□□ -2.01
HDAC4P56524 MIR21-201ENST00000362134 72 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 MIR29B2-201ENST00000385055 81 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 RNA5SP494-201ENST00000410653 129 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.5□□□□□ -2.01
HDAC4P56524 AL590556.1-201ENST00000423231 483 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC4P56524 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.5□□□□□ -2.01
HDAC4P56524 AL137792.2-201ENST00000443484 235 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.5□□□□□ -2.01
HDAC4P56524 AC079804.2-201ENST00000490376 200 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 RNU6-699P-201ENST00000517081 110 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AC020661.2-201ENST00000560114 134 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 SUB1P3-201ENST00000564581 315 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 DEFB122-202ENST00000569013 197 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AC005899.2-201ENST00000584353 90 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 Z98751.3-201ENST00000604447 521 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AC103810.6-201ENST00000606708 136 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AC008121.3-201ENST00000618726 433 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC4P56524 uc_338.22-201ENST00000622722 187 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AC091925.1-201ENST00000623204 462 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 SCARNA4-201ENST00000629045 128 ntBASIC2.5□□□□□ -2.01
HDAC4P56524 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.5□□□□□ -2.01
HDAC4P56524 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HDAC4P56524 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.5□□□□□ -2.01
HDAC4P56524 snoU2_19.1-201ENST00000362361 80 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 Y_RNA.31-201ENST00000362574 102 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 U8.10-201ENST00000384260 133 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 RNA5SP201-201ENST00000410316 124 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 AC018865.2-201ENST00000423631 129 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 AL161788.1-201ENST00000441805 169 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 AC068781.1-201ENST00000488231 618 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 RPL17P19-201ENST00000489069 552 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 AC026436.1-201ENST00000510537 270 ntBASIC2.49□□□□□ -2.01
HDAC4P56524 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.49□□□□□ -2.01
HDAC4P56524 RNU6-99P-201ENST00000364721 107 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 RNU6-1032P-201ENST00000384100 107 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 SNORA67.4-201ENST00000384688 142 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 SNORA12.2-201ENST00000391040 156 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 RNU6-482P-201ENST00000391068 107 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC4P56524 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC4P56524 PMCHL1-202ENST00000423102 261 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 MTCO2P12-201ENST00000427426 682 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC4P56524 AL353705.4-201ENST00000449661 238 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC4P56524 AC087477.1-201ENST00000465747 340 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 ANXA2P1-201ENST00000505539 926 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AC234781.5-201ENST00000508429 271 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 RNU6-1170P-201ENST00000515974 106 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 RNU6-307P-201ENST00000516743 106 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 RNU6-586P-201ENST00000517265 104 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.48□□□□□ -2.01
HDAC4P56524 AC009127.3-201ENST00000570531 403 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.48□□□□□ -2.01
HDAC4P56524 SNRPGP17-201ENST00000603780 214 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.48□□□□□ -2.01
HDAC4P56524 AC133104.2-201ENST00000615272 193 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AC245884.12-201ENST00000615364 59 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 AC090971.5-201ENST00000621102 293 ntBASIC2.48□□□□□ -2.01
HDAC4P56524 Y_RNA.112-201ENST00000363250 102 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 Y_RNA.405-201ENST00000383979 100 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 Y_RNA.451-201ENST00000384200 100 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 Y_RNA.524-201ENST00000384564 100 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 Y_RNA.561-201ENST00000384694 100 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 AC012306.1-201ENST00000423267 114 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC4P56524 CHEK2P4-201ENST00000450340 246 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 AC105758.1-201ENST00000506038 399 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.47□□□□□ -2.01
HDAC4P56524 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.47□□□□□ -2.01
HDAC4P56524 AL590705.4-201ENST00000532209 134 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 CYP4A27P-201ENST00000567218 190 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.47□□□□□ -2.01
HDAC4P56524 AC046143.2-201ENST00000609789 160 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 CTSLP2-204ENST00000629029 392 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
HDAC4P56524 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.46□□□□□ -2.01
HDAC4P56524 RNU6-490P-201ENST00000362985 107 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 Y_RNA.216-201ENST00000364205 93 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 RNU1-91P-201ENST00000364746 163 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 RNU4-9P-201ENST00000364951 139 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 RNU6-378P-201ENST00000384324 107 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 RNU6-308P-201ENST00000390957 107 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 HMGB3P2-201ENST00000411913 584 ntBASIC2.46□□□□□ -2.02
HDAC4P56524 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms