Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 USP9YP29-201ENST00000445112 563 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 AC005042.3-201ENST00000453230 174 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 AL353752.1-201ENST00000454946 260 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 VN1R83P-201ENST00000595685 445 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 AC022022.2-201ENST00000602989 360 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 BCRP9-201ENST00000605312 388 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 AC009268.2-201ENST00000621925 457 ntBASIC-1.35□□□□□ -2.63
CLTCL1P53675 Y_RNA.62-201ENST00000362840 99 ntBASIC-1.36□□□□□ -2.63
CLTCL1P53675 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
CLTCL1P53675 SNORA3B-201ENST00000391305 131 ntBASIC-1.36□□□□□ -2.63
CLTCL1P53675 USP9YP11-201ENST00000427537 717 ntBASIC-1.36□□□□□ -2.63
CLTCL1P53675 MIR340-201ENST00000362125 95 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 snoU2_19.1-201ENST00000362361 80 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RNU4-76P-201ENST00000364509 141 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 SNORA51.10-201ENST00000384418 136 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 MTCO2P31-201ENST00000402702 684 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-1.37□□□□□ -2.63
CLTCL1P53675 SRRM1P2-201ENST00000464531 1192 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-1.37□□□□□ -2.63
CLTCL1P53675 MTND2P33-201ENST00000506452 1031 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 AC117525.1-201ENST00000515228 503 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RNU6-202P-201ENST00000515998 96 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 MIR4441-201ENST00000582623 100 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RBM11P1-201ENST00000604951 799 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 AC093875.1-201ENST00000623688 504 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 TTK-211ENST00000627129 240 ntTSL 5 BASIC-1.37□□□□□ -2.63
CLTCL1P53675 AC010154.1-201ENST00000425857 269 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RPL39P34-201ENST00000477141 156 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-1.37□□□□□ -2.63
CLTCL1P53675 AC116562.3-201ENST00000506136 177 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RNU2-46P-201ENST00000517038 113 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RNU2-60P-201ENST00000517290 128 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 AP001429.1-201ENST00000602568 530 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 AL603839.4-201ENST00000624658 1005 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 MIR4275-201ENST00000636486 87 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 AC017104.5-201ENST00000637647 639 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 MIR3529-201ENST00000637713 78 ntBASIC-1.37□□□□□ -2.63
CLTCL1P53675 RNA5SP192-201ENST00000364404 120 ntBASIC-1.38□□□□□ -2.63
CLTCL1P53675 RNU6-534P-201ENST00000364877 106 ntBASIC-1.38□□□□□ -2.63
CLTCL1P53675 RNU6-921P-201ENST00000384361 107 ntBASIC-1.38□□□□□ -2.63
CLTCL1P53675 MIR1285-2-201ENST00000408311 88 ntBASIC-1.38□□□□□ -2.63
CLTCL1P53675 MRPS10P2-201ENST00000431226 381 ntBASIC-1.38□□□□□ -2.63
CLTCL1P53675 AC234772.3-201ENST00000602277 528 ntBASIC-1.38□□□□□ -2.63
CLTCL1P53675 AL159972.1-201ENST00000625150 448 ntBASIC-1.38□□□□□ -2.63
CLTCL1P53675 RNU6-161P-201ENST00000363051 106 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 RPP40P1-201ENST00000426762 456 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-1.39□□□□□ -2.63
CLTCL1P53675 RPL17P19-201ENST00000489069 552 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.39□□□□□ -2.63
CLTCL1P53675 SCARNA17-201ENST00000516183 144 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 DEFB131D-201ENST00000526803 184 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 DEFB131C-201ENST00000528817 165 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 AC063943.3-201ENST00000615562 356 ntBASIC-1.39□□□□□ -2.63
CLTCL1P53675 MIR548L-201ENST00000408303 86 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 RNU6-57P-201ENST00000411348 103 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.4□□□□□ -2.63
CLTCL1P53675 RPS15AP10-201ENST00000432472 382 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AC109327.2-201ENST00000448339 378 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AC048346.1-201ENST00000510247 144 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 SNORA31.10-201ENST00000516482 106 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 MTND2P7-201ENST00000521337 640 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 TMF1P1-201ENST00000576058 373 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AC068792.1-201ENST00000621354 417 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 RNU6-199P-201ENST00000362954 107 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 RNU6-31P-201ENST00000384388 108 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AL079342.2-201ENST00000403367 482 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 FCF1P10-201ENST00000407590 479 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 DNAJA1P2-201ENST00000421360 1197 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 DEFB130D-201ENST00000426866 237 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-1.4□□□□□ -2.63
CLTCL1P53675 AC010424.1-201ENST00000506336 297 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AC008628.1-201ENST00000508663 265 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 MIR3192-201ENST00000584920 77 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AL096861.1-201ENST00000610899 123 ntBASIC-1.4□□□□□ -2.63
CLTCL1P53675 AC106754.1-201ENST00000562632 1513 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 RNU6-655P-201ENST00000362858 107 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 SNORD32A-201ENST00000364805 84 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-1.41□□□□□ -2.64
CLTCL1P53675 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 OR6C5P-201ENST00000452388 923 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 MRPS36P5-201ENST00000551909 298 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 AC093519.1-201ENST00000566109 298 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 AL355598.1-201ENST00000604169 202 ntBASIC-1.41□□□□□ -2.64
CLTCL1P53675 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
CLTCL1P53675 MIR1185-1-201ENST00000408598 86 ntBASIC-1.42□□□□□ -2.64
CLTCL1P53675 AL451054.2-201ENST00000420896 202 ntBASIC-1.42□□□□□ -2.64
CLTCL1P53675 MTCO3P1-205ENST00000422088 832 ntBASIC-1.42□□□□□ -2.64
CLTCL1P53675 RNU6-1183P-201ENST00000517054 60 ntBASIC-1.42□□□□□ -2.64
CLTCL1P53675 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC-1.42□□□□□ -2.64
CLTCL1P53675 AP003716.2-201ENST00000528260 108 ntBASIC-1.42□□□□□ -2.64
CLTCL1P53675 MRPS36P4-201ENST00000534436 298 ntBASIC-1.42□□□□□ -2.64
CLTCL1P53675 AC018462.2-201ENST00000605375 395 ntBASIC-1.42□□□□□ -2.64
CLTCL1P53675 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-1.42□□□□□ -2.64
CLTCL1P53675 SNORA36.1-201ENST00000363424 132 ntBASIC-1.43□□□□□ -2.64
CLTCL1P53675 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.43□□□□□ -2.64
CLTCL1P53675 CCDC58P2-201ENST00000417131 366 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms