Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC009509.4-201ENST00000619202 509 ntBASIC0.29□□□□□ -2.36
NUP98P52948 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
NUP98P52948 CASC19-280ENST00000642102 1351 ntBASIC0.29□□□□□ -2.36
NUP98P52948 Y_RNA.60-201ENST00000362831 98 ntBASIC0.28□□□□□ -2.36
NUP98P52948 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.36
NUP98P52948 Y_RNA.363-201ENST00000365529 113 ntBASIC0.28□□□□□ -2.36
NUP98P52948 RNU6-969P-201ENST00000383900 105 ntBASIC0.28□□□□□ -2.36
NUP98P52948 MIR329-2-201ENST00000385029 84 ntBASIC0.28□□□□□ -2.36
NUP98P52948 AL136310.1-201ENST00000404926 654 ntBASIC0.28□□□□□ -2.36
NUP98P52948 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.28□□□□□ -2.36
NUP98P52948 AL031313.1-201ENST00000448435 256 ntBASIC0.28□□□□□ -2.36
NUP98P52948 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.28□□□□□ -2.36
NUP98P52948 AC112206.4-201ENST00000515142 405 ntBASIC0.28□□□□□ -2.36
NUP98P52948 SNORA59B-202ENST00000578183 701 ntBASIC0.28□□□□□ -2.36
NUP98P52948 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.28□□□□□ -2.36
NUP98P52948 AL162424.1-201ENST00000602325 221 ntBASIC0.28□□□□□ -2.36
NUP98P52948 AL357312.1-201ENST00000603879 298 ntBASIC0.28□□□□□ -2.36
NUP98P52948 AC112187.2-201ENST00000604345 283 ntBASIC0.28□□□□□ -2.36
NUP98P52948 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.28□□□□□ -2.36
NUP98P52948 RNU6-877P-201ENST00000383868 107 ntBASIC0.27□□□□□ -2.37
NUP98P52948 Y_RNA.476-201ENST00000384347 108 ntBASIC0.27□□□□□ -2.37
NUP98P52948 RNU6-692P-201ENST00000384496 107 ntBASIC0.27□□□□□ -2.37
NUP98P52948 RNU1-119P-201ENST00000391122 165 ntBASIC0.27□□□□□ -2.37
NUP98P52948 MIR1283-1-201ENST00000408494 87 ntBASIC0.27□□□□□ -2.37
NUP98P52948 RPS3AP1-201ENST00000413190 320 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.27□□□□□ -2.37
NUP98P52948 AC004854.1-201ENST00000440356 349 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.27□□□□□ -2.37
NUP98P52948 AL360271.2-201ENST00000447710 161 ntBASIC0.27□□□□□ -2.37
NUP98P52948 U7.7-201ENST00000459276 60 ntBASIC0.27□□□□□ -2.37
NUP98P52948 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.27□□□□□ -2.37
NUP98P52948 AC091435.1-201ENST00000505442 584 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.27□□□□□ -2.37
NUP98P52948 AC117522.1-201ENST00000509821 380 ntBASIC0.27□□□□□ -2.37
NUP98P52948 RNU6-948P-201ENST00000516374 107 ntBASIC0.27□□□□□ -2.37
NUP98P52948 RNU1-142P-201ENST00000516682 145 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AC091489.2-201ENST00000566263 604 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AC093913.1-201ENST00000614178 329 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AL121895.2-201ENST00000619558 447 ntBASIC0.27□□□□□ -2.37
NUP98P52948 BX322639.1-202ENST00000423987 2213 ntBASIC0.27□□□□□ -2.37
NUP98P52948 Y_RNA.46-201ENST00000362695 102 ntBASIC0.27□□□□□ -2.37
NUP98P52948 Y_RNA.124-201ENST00000363339 93 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.27□□□□□ -2.37
NUP98P52948 EEF1A1P40-201ENST00000412883 573 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AL031779.1-201ENST00000415663 330 ntBASIC0.27□□□□□ -2.37
NUP98P52948 SRRM1P2-201ENST00000464531 1192 ntBASIC0.27□□□□□ -2.37
NUP98P52948 TRBVB-201ENST00000477100 408 ntBASIC0.27□□□□□ -2.37
NUP98P52948 BET1P1-201ENST00000482276 359 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AL353765.1-201ENST00000605514 183 ntBASIC0.27□□□□□ -2.37
NUP98P52948 AC131159.1-201ENST00000621854 213 ntBASIC0.27□□□□□ -2.37
NUP98P52948 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.27□□□□□ -2.37
NUP98P52948 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
NUP98P52948 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
NUP98P52948 RNU6-61P-201ENST00000365528 109 ntBASIC0.26□□□□□ -2.37
NUP98P52948 MIR32-201ENST00000384965 70 ntBASIC0.26□□□□□ -2.37
NUP98P52948 SNORD89-201ENST00000390981 114 ntBASIC0.26□□□□□ -2.37
NUP98P52948 MIR300-201ENST00000401138 83 ntBASIC0.26□□□□□ -2.37
NUP98P52948 CETN4P-201ENST00000432407 469 ntBASIC0.26□□□□□ -2.37
NUP98P52948 RPS25P9-201ENST00000435591 252 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AL049829.1-201ENST00000465411 156 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AC090049.2-201ENST00000550377 109 ntBASIC0.26□□□□□ -2.37
NUP98P52948 MIR4742-201ENST00000581069 85 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AC078795.3-201ENST00000602913 472 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AC009994.1-201ENST00000606889 253 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AL139022.2-201ENST00000606934 443 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AC108747.1-201ENST00000609508 535 ntBASIC0.26□□□□□ -2.37
NUP98P52948 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
NUP98P52948 AC008250.2-201ENST00000615261 205 ntBASIC0.26□□□□□ -2.37
NUP98P52948 MIR8054-201ENST00000620877 86 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AC106754.2-201ENST00000623006 233 ntBASIC0.26□□□□□ -2.37
NUP98P52948 AC106858.1-201ENST00000637497 429 ntBASIC0.26□□□□□ -2.37
NUP98P52948 SNORD116.1-201ENST00000365628 92 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AF228730.1-201ENST00000397972 663 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AL590135.1-201ENST00000422215 156 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC019205.3-201ENST00000424573 156 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC010975.2-201ENST00000427781 588 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AL133396.1-201ENST00000432048 687 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC016700.2-201ENST00000446011 156 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC013470.1-201ENST00000453438 462 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC233266.1-201ENST00000454518 96 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC015911.1-201ENST00000495111 156 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC016632.1-201ENST00000503994 196 ntBASIC0.25□□□□□ -2.37
NUP98P52948 RNU2-34P-201ENST00000516534 121 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.25□□□□□ -2.37
NUP98P52948 AC242852.1-201ENST00000612151 96 ntBASIC0.25□□□□□ -2.37
NUP98P52948 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
NUP98P52948 AC116165.2-201ENST00000616705 206 ntBASIC0.25□□□□□ -2.37
NUP98P52948 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.25□□□□□ -2.37
NUP98P52948 AC244015.1-201ENST00000622301 99 ntBASIC0.25□□□□□ -2.37
NUP98P52948 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.25□□□□□ -2.37
NUP98P52948 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
NUP98P52948 SNORA2A-201ENST00000383885 135 ntBASIC0.24□□□□□ -2.37
NUP98P52948 RNU6-793P-201ENST00000384233 104 ntBASIC0.24□□□□□ -2.37
NUP98P52948 C1DP2-201ENST00000418167 426 ntBASIC0.24□□□□□ -2.37
NUP98P52948 C1DP4-201ENST00000455429 424 ntBASIC0.24□□□□□ -2.37
NUP98P52948 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.24□□□□□ -2.37
NUP98P52948 RNU7-94P-201ENST00000459576 63 ntBASIC0.24□□□□□ -2.37
NUP98P52948 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.24□□□□□ -2.37
NUP98P52948 AP002001.1-203ENST00000534002 267 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms