Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
USP11P51784 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 RNU5F-3P-201ENST00000363767 117 ntBASIC3.87□□□□□ -1.79
USP11P51784 RNU4-10P-201ENST00000364383 140 ntBASIC3.87□□□□□ -1.79
USP11P51784 RNU6-153P-201ENST00000364422 104 ntBASIC3.87□□□□□ -1.79
USP11P51784 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 SNORD116-14-201ENST00000383894 92 ntBASIC3.87□□□□□ -1.79
USP11P51784 SNORD116-17-201ENST00000383929 92 ntBASIC3.87□□□□□ -1.79
USP11P51784 SNORD116-15-201ENST00000384445 92 ntBASIC3.87□□□□□ -1.79
USP11P51784 SNORD116-19-201ENST00000384729 92 ntBASIC3.87□□□□□ -1.79
USP11P51784 MIR184-201ENST00000384962 84 ntBASIC3.87□□□□□ -1.79
USP11P51784 MIR591-201ENST00000385290 95 ntBASIC3.87□□□□□ -1.79
USP11P51784 SNORA26.5-201ENST00000391215 123 ntBASIC3.87□□□□□ -1.79
USP11P51784 U3.40-201ENST00000408706 208 ntBASIC3.87□□□□□ -1.79
USP11P51784 AC090525.1-201ENST00000479116 478 ntBASIC3.87□□□□□ -1.79
USP11P51784 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USP11P51784 MIR4744-201ENST00000581563 82 ntBASIC3.87□□□□□ -1.79
USP11P51784 AC069294.1-201ENST00000608397 350 ntBASIC3.87□□□□□ -1.79
USP11P51784 AC096577.2-201ENST00000611455 153 ntBASIC3.87□□□□□ -1.79
USP11P51784 AC008873.1-201ENST00000625051 138 ntBASIC3.87□□□□□ -1.79
USP11P51784 SNORA50A-202ENST00000629536 136 ntBASIC3.87□□□□□ -1.79
USP11P51784 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP11P51784 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.86□□□□□ -1.79
USP11P51784 AL513302.2-201ENST00000562313 1842 ntBASIC3.86□□□□□ -1.79
USP11P51784 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP11P51784 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.86□□□□□ -1.79
USP11P51784 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
USP11P51784 RNU6-899P-201ENST00000363947 107 ntBASIC3.86□□□□□ -1.79
USP11P51784 RNA5SP72-201ENST00000364442 117 ntBASIC3.86□□□□□ -1.79
USP11P51784 RNU6-245P-201ENST00000384020 107 ntBASIC3.86□□□□□ -1.79
USP11P51784 Y_RNA.572-201ENST00000384757 98 ntBASIC3.86□□□□□ -1.79
USP11P51784 HSPE1P26-201ENST00000405341 275 ntBASIC3.86□□□□□ -1.79
USP11P51784 RNA5SP475-201ENST00000410568 110 ntBASIC3.86□□□□□ -1.79
USP11P51784 RPS4XP2-201ENST00000458402 793 ntBASIC3.86□□□□□ -1.79
USP11P51784 AC146507.2-201ENST00000460608 476 ntBASIC3.86□□□□□ -1.79
USP11P51784 RPL23AP67-201ENST00000465341 474 ntBASIC3.86□□□□□ -1.79
USP11P51784 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.86□□□□□ -1.79
USP11P51784 SCARNA8-201ENST00000515924 131 ntBASIC3.86□□□□□ -1.79
USP11P51784 AC090897.2-201ENST00000581715 130 ntBASIC3.86□□□□□ -1.79
USP11P51784 AL078604.3-201ENST00000615580 211 ntBASIC3.86□□□□□ -1.79
USP11P51784 AF117829.1-206ENST00000621883 3802 ntBASIC3.86□□□□□ -1.79
USP11P51784 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.86□□□□□ -1.79
USP11P51784 AC058791.1-201ENST00000608412 3198 ntBASIC3.86□□□□□ -1.79
USP11P51784 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
USP11P51784 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USP11P51784 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP11P51784 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.85□□□□□ -1.79
USP11P51784 RNU1-62P-201ENST00000362599 164 ntBASIC3.85□□□□□ -1.79
USP11P51784 RNU6-1325P-201ENST00000364905 105 ntBASIC3.85□□□□□ -1.79
USP11P51784 SNORA9-201ENST00000384215 133 ntBASIC3.85□□□□□ -1.79
USP11P51784 Y_RNA.542-201ENST00000384641 111 ntBASIC3.85□□□□□ -1.79
USP11P51784 MIR483-201ENST00000385070 76 ntBASIC3.85□□□□□ -1.79
USP11P51784 RPL30P13-201ENST00000418873 348 ntBASIC3.85□□□□□ -1.79
USP11P51784 HMGN2P10-201ENST00000448085 265 ntBASIC3.85□□□□□ -1.79
USP11P51784 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.85□□□□□ -1.79
USP11P51784 HMGN2P16-201ENST00000456802 261 ntBASIC3.85□□□□□ -1.79
USP11P51784 AC008155.2-201ENST00000464337 397 ntBASIC3.85□□□□□ -1.79
USP11P51784 AC136628.3-201ENST00000521868 290 ntBASIC3.85□□□□□ -1.79
USP11P51784 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.85□□□□□ -1.79
USP11P51784 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.85□□□□□ -1.79
USP11P51784 DNAJC19P2-201ENST00000593340 302 ntBASIC3.85□□□□□ -1.79
USP11P51784 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.85□□□□□ -1.79
USP11P51784 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
USP11P51784 AC017071.1-201ENST00000564407 2204 ntBASIC3.85□□□□□ -1.79
USP11P51784 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.79
USP11P51784 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.84□□□□□ -1.79
USP11P51784 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP11P51784 MIR626-201ENST00000385032 94 ntBASIC3.84□□□□□ -1.79
USP11P51784 RNA5SP390-201ENST00000410191 113 ntBASIC3.84□□□□□ -1.79
USP11P51784 NDUFS5P4-201ENST00000412983 318 ntBASIC3.84□□□□□ -1.79
USP11P51784 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.84□□□□□ -1.79
USP11P51784 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.84□□□□□ -1.79
USP11P51784 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.84□□□□□ -1.79
USP11P51784 RPL26P9-201ENST00000457466 433 ntBASIC3.84□□□□□ -1.79
USP11P51784 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.84□□□□□ -1.79
USP11P51784 RNU6-1211P-201ENST00000459179 105 ntBASIC3.84□□□□□ -1.79
USP11P51784 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.84□□□□□ -1.79
USP11P51784 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.84□□□□□ -1.79
USP11P51784 RN7SKP164-201ENST00000516138 266 ntBASIC3.84□□□□□ -1.79
USP11P51784 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.84□□□□□ -1.79
USP11P51784 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.84□□□□□ -1.79
USP11P51784 AC013791.1-201ENST00000616619 62 ntBASIC3.84□□□□□ -1.79
USP11P51784 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.84□□□□□ -1.79
USP11P51784 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
USP11P51784 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
USP11P51784 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.84□□□□□ -1.8
USP11P51784 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
USP11P51784 RNU6-1048P-201ENST00000364054 107 ntBASIC3.83□□□□□ -1.8
USP11P51784 RNU6-270P-201ENST00000364131 105 ntBASIC3.83□□□□□ -1.8
USP11P51784 Y_RNA.415-201ENST00000384012 112 ntBASIC3.83□□□□□ -1.8
USP11P51784 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.83□□□□□ -1.8
USP11P51784 RPL21P10-201ENST00000463521 490 ntBASIC3.83□□□□□ -1.8
USP11P51784 AC021205.2-201ENST00000480069 347 ntBASIC3.83□□□□□ -1.8
USP11P51784 AC103975.1-201ENST00000482506 483 ntBASIC3.83□□□□□ -1.8
USP11P51784 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.83□□□□□ -1.8
USP11P51784 Y_RNA.686-201ENST00000516548 134 ntBASIC3.83□□□□□ -1.8
USP11P51784 RNU6-453P-201ENST00000516819 85 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms